This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 89145 | TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG | Design primers |
| 131937 | TGATGGCGG-TGATGGCGG-TGATGGCGG | Design primers |
| 261588 | TTCTTCTCTTTTTTC-TTCTTCTCTTTTTTC-TTCTTCTCTTTTTTC | Design primers |
| 263170 | AAAATAGGAA-AAAATAGGAA-AAAATAGGAA | Design primers |
| 320145 | AAAACTGCAA-AAAACTGCAA-AAAACTGCAA-AAAACTGCAA-AAAACTGCAA-AAAACTGCAA-AAAACTGCAA-AAAACTGCAA-AAAACTGCAA | Design primers |
| 368828 | TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG | Design primers |
| 383107 | TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG | Design primers |
| 432690 | TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG | Design primers |
| 450254 | ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT | Design primers |
| 509937 | TT-TT-TT-TT-TT-TT-TT-TT-TT-TT-TT-TT-TT-TT | Design primers |
| 619619 | AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC | Design primers |
| 694786 | GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC-GTTGC | Design primers |
| 703278 | TTTATCC-TTTATCC-TTTATCC-TTTATCC | Design primers |
| 703582 | GGTGCAT-GGTGCAT-GGTGCAT-GGTGCAT-GGTGCAT-GGTGCAT-GGTGCAT | Design primers |
| 815705 | TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG | Design primers |
| 932676 | TGGTCA-TGGTCA-TGGTCA-TGGTCA-TGGTCA-TGGTCA-TGGTCA | Design primers |
| 969586 | ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT-ACAGTCT | Design primers |
| 996913 | TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC-TGAC | Design primers |
| 1113494 | CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA | Design primers |
| 1115165 | TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC | Design primers |
| 1116054 | CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT | Design primers |
| 1116886 | CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT | Design primers |
| 1180819 | TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG-TAGGCTG | Design primers |
| 1416900 | GTCTACA-GTCTACA-GTCTACA-GTCTACA-GTCTACA-GTCTACA-GTCTACA-GTCTACA-GTCTACA-GTCTACA | Design primers |
| 1689117 | AAAAAG-AAAAAG-AAAAAG-AAAAAG-AAAAAG | Design primers |
| 1776061 | TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG-TAGACTG | Design primers |
| 1806384 | ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT-ACAGCCT | Design primers |
| 1914847 | TGTC-TGTC-TGTC-TGTC-TGTC-TGTC | Design primers |
| 1919133 | TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT | Design primers |
| 2037955 | AGCCTAC-AGCCTAC-AGCCTAC-AGCCTAC-AGCCTAC-AGCCTAC-AGCCTAC-AGCCTAC-AGCCTAC-AGCCTAC-AGCCTAC | Design primers |
| 2046880 | AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA-AGCCTACA | Design primers |
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