Microsatellites /Tandem Repeats database

Genome: Salmonella enterica subsp. arizonae serovar 62:z4,z23:--

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
89114TATTAATATCAATATTAATATTGADesign primers
207302TACAGG-GACAGG-GACAGG-GACAGG-GACAGGDesign primers
910160TA-TT-GA-TA-TA-TA-TA-TA-TA-TA-TA-TA-TA-TA-TADesign primers
1168756TATTGAGGC-TACTGTTGC-TACTGTTGC-TACTGTTGC-TACTGTTGC-TACTGTTGCDesign primers
1224425GCACCTGAGCCAGCAAGA-CAACCTGAGCCAGCAAGA-CAATCTGAGCCAGCAAGA-CAATCTGAGCCAGCAAGADesign primers
1311212TATCGTAAG-AATCGTAAG-AATCGTAAG-AATCGTAAGDesign primers
1427484CTGGGG-ATGGGG-ATGGGG-ATGGGGDesign primers
1441957TGCCAC-CGCCAC-CGCCAC-CGCCAC-CGCCACDesign primers
1844393CTACCACCATTACCTGGTGCGCCACGACCGTTACCTGTTGCGCCACCGATATTACCTGGTGCGCCACCGCCATTACCTGGTGAGDesign primers
1848481GTTATCAATAATTATCAAGAATTATCAATADesign primers
2079915GACGACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGA-AGCTACTGADesign primers
2317818TATCAATTG-TGTGAATCG-TGTGAATCG-TGTGAATCG-TGTGAATCG-TGTGAATCG-TGTGAATCG-TGTGAATCG-TGTGAATCG-TGTGAATCGDesign primers
2353554CTTATTCTTATCCCTATTCTCATTDesign primers
2456977GCGCTGGATGCGCTCGATGCGCTGAATDesign primers
2586127TACGTTGGACAATCGTTGGACATCCGTTGGACADesign primers
2743715CGGCAACGTCGGCATCGTCGTCAACGTDesign primers
2862925GTTATC-ATTTTC-ATTTTC-ATTTTC-ATTTTC-ATTTTCDesign primers
3106323GCAACGGCAGCATCGGCAGGAACGGCADesign primers
3260244TTTTCAACA-TTTTCGACA-TTTTCGACA-TTTTCGACADesign primers
3313824CACCAG-CACCAG-CGCCAG-CGCCAGDesign primers
3765231ATGGTG-ATGCTG-ATGCTG-ATGCTGDesign primers
3809698ACCAGTGAACAGTAGTGAACAGTAGTGAACDesign primers
4244523GGACGGCGGCGACGGCGGTGACGGCGGDesign primers
4527973TTCTGGCTGTGGCGCCGG-GTCTGGCTGTGGCGCCGG-GTCTGGCTGCGGTGCCGG-GTCTGGCTGTGGTGCCGG-GTCTGGCTGTGGTGCCGG-GTCTGGCTGTGGTGCCGG-GTCTGGCTGTGGTGCCGG-GTCTGGCTGTGGTGCCGG-GTCTGGCTGTGGCGCCGG-GTCTGGCTGCGGTGCCGGDesign primers
4531972CATGAT-GGTCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGTDesign primers
4579619AACACAAC-AACACAAC-ATCACAACDesign primers

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