Microsatellites /Tandem Repeats database

Genome: Halorhodospira halophila SL1

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
362453TTCGCCATT-TTCGCCATT-TTCGCCATTDesign primers
442960CATGAACTC-CATGAACTC-CATGAACTC-CATGAACTCDesign primers
517528TCGGGT-TCAGGT-TCAGGT-TCAGGT-TCAGGT-TCAGGT-TCAGGT-TCAGGTDesign primers
517591GGTTCG-GGTTCG-GGTTCG-GGTTCGDesign primers
802923GCCCCGGAACTGC-GCCCCGGAACTGC-GCCCCGGAACCGCDesign primers
1101357TCCAGC-TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGCDesign primers
1487257CAACAC-CAACAC-CAACAC-CAACACDesign primers
2430589GAACCCGAGCCGGAACCCGAGCCCGAACCGGAGCCGDesign primers
2430661GAGCCA-GAGCCC-GAGCCC-GAGCCC-GAGCCC-GAGCCC-GAGCCC-GAGCCCDesign primers

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