This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 223272 | CCAAACCCTGCAACAGTG-CCAAACCCTGCAACAGTG-CCAAACCCTGCAATAGTG | Design primers |
| 317308 | CAAAAGAT-CAAAAGAT-CAAAAGAT | Design primers |
| 340168 | GCTTTTGA-TCTTTTGA-TCTTTTGA-TCTTTTGA-TCTTTTGA-TCTTTTGA | Design primers |
| 501124 | GGTGGTGCG-GGTGGTGCG-GGTGGTGCG | Design primers |
| 555199 | GTAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG | Design primers |
| 555380 | TAGCGGAAGAGGCTCAGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA | Design primers |
| 556453 | CGGATAGCGGAAGAGGCT-CGGATAGCGGAAGAGGCC-CGTATAGCGGAAGAGGCT-CGGATAGCGGAAGAGGCT-CGGATAGCGGAAGAGGCT-CGGATAGCGGAAGAGGTT-CGGATAGCGGAAGAGGTT-CGGATAGCGGAAGAGGCT-CGGATAGCGGAAGAGGCT-CGGATAGCGGAAGAGGCT-CGGATAGCGGAAGAGGCT | Design primers |
| 556652 | GTGTAGCGGAAGAGGCTC-GTGTAGCGGAAGAGGCTC-GTGTAGCGGAAGAGGCTC-GTATAGCGGAAGAGGCTC-GTGTAGCGGAAGAGGCTC | Design primers |
| 556743 | GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG | Design primers |
| 557773 | GAGGAGGCTCGTGTAGCGGAAGAGGCTCGTGTAGCGGAAGAGGCTCGTGTAGCG | Design primers |
| 557828 | AAGAGGCTCGGATAGCGG-AAGAGGCTCGGATAGCGG-AAGAGGCTCGGATAGCGG-AAGAGGCTCGGATAGCGG-AAGAGGCTCGGATAGCGG-AAGAGGCTCGGATAGCGG-AAGAGGCTCGGATAGCGG-AAGAGGCTCGGATAGCGG-AAGAGGCTCGGATAGCGG | Design primers |
| 558001 | GTAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG | Design primers |
| 710162 | GGCGGCTACGGTGGCTAT-GGCGGTTACGGTGGCTAT-GGCGGTTACGGTGGCTAT-GGCGGTTACGGTGGCTAT | Design primers |
| 810322 | GGCACA-GGCACA-GGCACA-GGCACA-GGCACA | Design primers |
| 810454 | GGCTCTGGCTCGGGCTCAGGCTCGGGCTCGGGCTCGGGCTCAGGCTCG | Design primers |
| 810537 | GGGATCGGGCTC-TGGATCGGGCTC-TGGATCGGGCTC | Design primers |
| 820477 | TTTTGATT-TTTTGATT-TTTTGATT | Design primers |
| 879502 | TGTTACCGGAACCGT-GGTTACCGGAACCGT-GGTTACCGGAACCGT | Design primers |
| 902675 | CAGCAGGAGGGGCAC-CAGCAGGAGGGGCAC-CAGCAGCAGGGGCAC-CAGCAGCAGGGGCAC-CAGCAGCAGGGGCAC | Design primers |
| 902751 | AGCACCAGCAGGAGG-GGCACCAGCAGGAGG-GGCACCAGCAGGAGG-GGCACCAGCAGGAGG | Design primers |
| 1153164 | TGGGTGCGGCCTGTTGCA-CGGGTGCGGCCTGTTGCA-CGGGTGCGGCCTGTTGCA-CGGGTGCGGCCTGTTGCA-CGGGTGCGGCCTGTTGCA | Design primers |
| 1281032 | CCTTCTTGACGT-CCCTCTTGACGT-CCCTCTTGACGT-CCCTCTTGACGT | Design primers |
| 1389113 | ATACAGAAAGGG-CTTCAGAAAGGG-CTTCAGAAAGGG-CTTCAGAAAGGG-CTTCAGAAAGGG-CTTCAGAAAGGG | Design primers |
| 1398571 | GGTGGC-GGTGGC-GGTGGC-GGTGGC | Design primers |
| 1679257 | CTAGGTAATTAC-CTAGGTAATTCC-CTAGGTAATTCC-CTAGGTAATTCC | Design primers |
| 1797063 | CGCCGAAGAAGTCGCCGAAGAAGA-GGCCGAGGAAGTCGCCGAAGAAGA-GGCCGAGGAAGTCGCCGAAGAAGA-GGCCGAGGAAGTCGCCGAAGAAGA | Design primers |
| 1797178 | GAAGAGGCTGAGGAAGTCGCCGAA-GAAGAGGCTGAGGAAGAGGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-AAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGCTGAGGAAGTCGCCGAA-GAAGAGGCTGAGGAAGTCGCCGAA-GAAGAGGCTGAGGAAGTCGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGCCGAGGAAGTCGCCGAA-GAAGAGGGCGAGGAAGTCGCCGAA | Design primers |
| 1797611 | AAGAGGCCGAAG-AAGAGGCCGAAG-AAGAGGCCGAAG-AAGAGGCCGAAG-AAGAGGCCGAGG | Design primers |
| 1797679 | GAGGAAGTCGCCGAAGAAGAGGCTGAGCAAGCCGCCGAAGAAGAGGCTGAGCAAGCCGCCGAAGAAGAGGCTGAGGAAGTCGCCGAAGAAGAGGCTGAGCAAGCCGCCGAAGAAGAGGCTGAGGAAATCGCCGAAGAAGAGGCTGAGGAAATCGCCGAAGAAGAGGCTGAGGAAATCGCCGAAGAAGAGGCTGAGGAAGTCGCCGAAGAAGAGGCTGAGGAAGCCGCCGAAGAAGAGGCTGAGGAAGCCGCCGAAGAAGAGGCTGAGGAAGCCGCCGAAGAAGAGGCTGAGCAAGCCGCCGAAGAAGAGGCT | Design primers |
| 1797999 | CGCCGAAGAAGAGGCCGAGGAAGTCGCCGAAGAAGAGGCTGAGCAAGTCGCCGAAGAAGAGGCTGAGCAAGTCGCCGAAGAAGAGGCCGAGGAAGTCGCCGAAGAAGAGGCCGAGGAAGC | Design primers |
| 1798153 | GAGGCAGAGGAAGTCGCCGAAGAA-GATGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GATGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCTGAGGAAGTCGTCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCTGAGGAAGCCGCCGAAGAA-GAGGCTGAGGAAGCCGCCGAAGAA-GAGGCTGAGGAAGCCGCCGAAGAA-GAGGCTGAGGAAGCCGCCGAAGAA | Design primers |
| 1798586 | AGGCTGAGCAAGCCGCCGAAGAAG-AGGCTGAGCAAGCCGCCGAAGAAG-AGGCTGAGCAAGCCGCCGAAGAAG | Design primers |
| 2087734 | GGTTTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG-GGATTGAAGGGGAGGTAG | Design primers |
| 2246975 | CATCTCAATGATGACACTCT-GTTCTCAATGATGACACTCT-GTTCTCAATGATGACACTCT-GTTCTCAATGATGACACTCT | Design primers |
| 2441553 | TGACGCCCTTTC-TGAAGCCCTTTC-TGAAGCCCTTTC-TGAAGCCCTTTC | Design primers |
| 2656336 | TCGGCGGCGGCCTTCTCAGCGGCGGCCTTCTCAGCGGCGGCCTTC | Design primers |
| 2656384 | GCGGCGGCCTGTTCGGCGGCAGCCTGTTCGGCGGCAGCCTGTTCGGCGGCAGCCTGTTCGGCGGCAGCCTGTTCGGCGGCGGCTTGTTCGGCAGCGGCCTGTTCGGCGGCGGCTTGTTCGGCAGCGGCCTGTTCGGCGGCGGCTTGTTCGGCGGCAGCCTGTTCG | Design primers |
| 2656600 | GCCTGCTCGGCGGCAGCCTTCTCGGCGGCAGCCTTCTCGGCGGCA | Design primers |
| 2656693 | TGTTCGGCGGCAGCT-TGTTCGGCGGCGGCT-TGTTCGGCGGCGGCT-TGTTCGGCGGCAGCT | Design primers |
| 2656798 | TGTTCGGCGGCAGCT-TGTTCGGCGGCGGCT-TGTTCGGCGGCGGCT-TGTTCGGCGGCAGCT | Design primers |
| 2656939 | GCAGCGGCCTGTTCGGCAGCGGCCTTTTCGGCAGCAGCCTGTTCG | Design primers |
| 2657251 | TCAGCAGCAGCCTTTTCGGCAGCAGCCTTTTCAGCAGCAGCCTTT | Design primers |
| 2657305 | GCCTGTTCGGCGGCGGCCTGTTCAGCGGCGGCCTGTTCGGCGGCAGCCTGTTCGGCGGCG | Design primers |
| 2657509 | GCAGCGGCCTGTTCGGCAGCGGCCTGCTCGGCGGCGGCCTGTTCGGCAGCGGCCTGTTCGGCAGCGGCCTGTTCG | Design primers |
| 2657585 | CGGCGGCCTGCTCGGCGGCGGCCTGTTCGGCGGCGGCCTGTTCGG | Design primers |
| 2657647 | GCAGCCTGTTCGGCGACAGCCTGTTCGGCGGCGGCCTGTTCGGCG | Design primers |
| 2657738 | CGGCCTGTTCGGCGG-CGGCCTGTTCGGCGG-CAGCCTGTTCGGCGG-CAGCCTGTTCGGCGG-CAGCCTGTTCGGCGG | Design primers |
| 2688493 | CCCGTAGCGGTGCCA-CCCGTAGCGGTGCCA-CCCGTAGTGGTGCCA | Design primers |
| 2738360 | GGTTACCCCATGGGCGGCTACCCCATGGGCGGTTACCCCATGGGC | Design primers |
| 2753697 | GCCGGAGCTGCCGCTGGGGCATCACCAGGAGCTGCCGCTGGGGCATCACCAGGAGCTGCCGCTGGGGCATCA | Design primers |
| 2790024 | CCGCCGGTGGTG-TCGCCGGTGGTG-TCGCCGGTGGTG-TCGCCGGTGGTG | Design primers |
| 2790104 | GCCGGTGGTGTC-GCCGGTGGTGTC-GCCGGTGGTGCC | Design primers |
| 2863067 | GGCTGTGCCAAGGGG-GCCTGTGCCAAGGGG-GCCTGTGCCAAGGGG-GCCTGTGCCAAGGGG-GCCTGTGCCAAGGGG-GCCTGTGCCAAGGGG | Design primers |
| 2878867 | CTCGACCTCCTGAACGGACTCGGCCTCCTGAACGGACTCGACCTCCTGAACGGGCTCGACCTCCTGAACGGACTCGACCTCCTGAACGGG | Design primers |
| 2879042 | ACGGGCTCGACCTCCTGA-ACGGGCTCGACCTCCTGA-ACGGACTCGACCTCCTGA-ACGGACTCGACCTCCTGA-ACGGGCTGGACCTCCTGA | Design primers |
| 2879150 | ACGGGCTCGACCTCCTGA-ACGGGCTCGACCTCCTGA-ACGGACTCGACCTCCTGA | Design primers |
| 2898459 | TCGCTTCCGGCTCATGGCTGG-CGGCTTCCGGCTCATGGCTGG-CGGCTTCCGGCTCATGGCTGG-CGGCTTCCGGCTCATGGCTGG-CGGCTTCCGGCTCATGGCTGG-CGGCTTCCGGCTCATGGCTGG-CGGCTTCCGGCTCATGGCTGG-CGGCTTCCGGCTCATGGCTGG-CGGCTTCCGGCTCATGGCTGG-CGGCTTCCGGCTCATGGCTGG-CGGCTTCCGGCTCATGGCTGG | Design primers |
| 2907076 | GCTGTTTTGGCCACTTTGGCTGTTTTGGCCGCTTTGGCTGTTTTGGCCGCTTTG | Design primers |
| 2907235 | TGAGCAGCCGCACCCTTAGCAGCCGCACCCTTAGCAGCCGCACCC | Design primers |
| 2932910 | CAACAAAACACCCCGGCAACAAAACACCCTGGCAACAAAACACCCTGG | Design primers |
| 3174309 | TGGTGGTGCTCACCATCGTGGTCATGGTGGTGGGCACCATCGTGGTCATGGTGGTGGGCACCATCGTGGTCA | Design primers |
| 3238663 | AGCTTTGCCATGA-GGCTTTGCCATGA-GGCTTTGCCATGA-GGCTTTGCCATGA | Design primers |
| 3253372 | ACCCTCTTGACG-GCCCTCTTGACG-GCCCTCTTGACG | Design primers |
| 3321377 | CCTTCTTGACGG-CCCTCTTGACGG-CCCTCTTGACGG-CCCTCTTGACGG | Design primers |
| 3414416 | CCTTCTTGACGGCCCTCTTGACGGCCCTCTTGACGG | Design primers |
| 3494792 | ACCCTCTTGACG-GCCCTCTTGACG-GCCCTCTTGACG | Design primers |
| 3566130 | ACCCTCTTGACG-ACCCTCTTGACG-ACCCTCTCGACG-GCCCTCTTGACG-GCCCTCTTGACG | Design primers |
| 3740277 | GCCTCA-GCTTCA-GCCTCA-GCCTCA-GCCTCA-GCCTCA | Design primers |
| 3740355 | GCCTCA-GCCTCT-GCCTCT-GCCTCT-GCCTCT-GCCTCT | Design primers |
| 3740421 | CCAGCAGCCTCGCCGTCAGCTCCAGTGGCCTCGCCGTCAGCT-CCAGCAGCCTCGCCGTCAGCTCCAGTGGCCTCGCCGTCAGCT-CCAGTGGCCTCGCCGTCAGCTCCAGTGGCCTCGCCGTCAGCT | Design primers |
| 3740748 | CCTTGGCCTTGACCCTGGCCTTGACCCTGGCCTTGA | Design primers |
| 3816118 | CCGTGAGTTCCGGTGAGTTCCGGTGAGTTC | Design primers |
| 3824038 | ACACCCACACCAGCCCGCTCACCCACACCAGCCCGCTCACCCACACCAGCCCGC | Design primers |
| 3886088 | AGCCCAGCGCAAGCCCCTAACA-CCCCCAGCGCAAGCCCCTAACA-CCCCCAGCGCAAGCCCCTAACA | Design primers |
| 3946096 | TGTCTTAG-TGTCTTAG-TGTCTTAG-TGTCTTAG | Design primers |
| 4009170 | TTTGCAAACTTAGC-TTTGCAAACTTAGC-TTTGCAAACTTACC | Design primers |
| 4051413 | AGATTATGGGGAACCCAGCCGGGGTTATGGGGAACCCAGCCGGGGTTATGGGGAACCCAGCCG | Design primers |
| 4066635 | GGTGGTGG-GGTGGTGG-GGTGGTGG | Design primers |
| 4528247 | CATCTTCGGCTTCGGGCTCTTCTTCGGCTTCGGGCTCTTCTTCGGCTTCGGGCT | Design primers |
| 4528302 | TTCCTCAGCTTCGGGCTC-TTCCTCAGCTTCGGGCTC-TTCCTCAGCTTCGGGCTC | Design primers |
| 4528360 | TCGGCTTCGGGCTCTTCTTCGGCTTCGGGCTCTTCCTCAGCTTCGGGCTCTTCT | Design primers |
| 4528634 | GTTCTTCCTCGACTTCAG-GCTCTTCCTCGACTTCAG-GCTCTTCCTCGACTTCAG-GCTCTTCCTCGACTTCAG-GCTCTTCCTCGACTTCAG-GCTCTTCCTCGACTTCAG-GCTCTTCCTCGACTTCAG | Design primers |
| 4528903 | GGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA-AGCTCTTCCTCAGCCTCA | Design primers |
| 4529260 | TCTTCCTCAACTTCGGGCGCAGCT-TCTTCCTCGGCTTCGGGCGCAGCT-TCTTCCTCGGCTTCGGGCGCAGCT-TCTTCCTCGGCTTCGGGCGCAGCT-TCTTCCTCGGCTTCGGGCGCAGCT | Design primers |
| 4529588 | CTTCGGACTCTTCCTCCG-CTTCGGGCTCTTCCTCCG-CTTCGGACTCTTCCTCCG-CTTCGGACTCTTCCTCGG-CTTCGGGCTCTTCCTCCG | Design primers |
| 4529716 | TCAGGCTCTTCCTCGGCTTCGGGCTCTTCCTCGGCTTCGGGCTCTTCCTCGGCT | Design primers |
| 4667797 | TGGCATCTGCATATTGGGCATCTGCATATTAGGCATCTGCATATTGGGCATCTGCATATT | Design primers |
| 4710105 | CAACCCTCTAACAAGCCACCCTCTAACAAGCCACCCTCTAACAAG | Design primers |
| 4710151 | CACCCTCTAACAAAC-CACCCTCTAACAAAC-CACCCTCTAACAAAC-CACCCTCTAACAAAC-CACCCTCTAACAAAC-CACCCTCTAACAAAC-CACCCTCTAACAAAC-CACCCTCTAACAAAC-CACCCTCTAACAAAC-CACCCTCTAACAAAC | Design primers |
| 4711849 | CTCTTCCGCTCTTTCCTCCCGCTTCCGCTCTTTCCTCCCGCTTCCGCTCTTTCCTCCCGCTTCCGCTCTTTCCTCCCGCTTCCGCTCTTTCCTCCCGCTTCCGCTCTTTCCTCCCTCTTCCGCTCTTTCCTCCCTCTTCCGCTCTTTTCTCCCTCTTCCGCTCTTCCCTCCCTCTTCCGCTCTTTCCCCC | Design primers |
| 4712053 | CCTCCCGCTTCCGCTCTTTCCTCCCGCTTCCGATCTTTCCTCCCGCTTCCGATCTTTCCTCCCGCTTCCGATCTTTCCTCCCGCTTCCCCTCTTTCCTCCCTCTTCCGCTCTTT | Design primers |
| 4712168 | CTCCCTCTTCCGCTCTTCCCTCGCTCTTCCGCTCTTCCCTCCCTCTTCCGCTCTTCCCTCCCTCTTCTGCTCTTCCCTCCCTCTTCCGCTCTTCCCTCCCGCTTCCGCTCTTCC | Design primers |
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