This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 241676 | ACCGCAGCGCAG-ACCGCAGCGCAG-ACCGCAGCGCAG | Design primers |
| 438857 | GTTTGTCCT-GTTTGTCCT-GTTTGTCCT | Design primers |
| 448846 | GTCACTA-GTCACTA-GTCACTA-GTCACTA-GTCACTA-GTCACTA-GTCACTA-GTCACTA | Design primers |
| 448903 | TCCCTTG-TCCCTTG-TCCCTTG-TCCCTTG-TCCCTTG-TCCCTTG-TCCCTTG-TCCCTTG-TCCCTTG | Design primers |
| 448967 | CACTCCT-CACTCCT-CACTCCT-CACTCCT-CACTCCT-CACTCCT | Design primers |
| 576183 | CACTAAT-CACTAAT-CACTAAT-CACTAAT-CACTAAT-CACTAAT | Design primers |
| 618869 | TGACTAG-TGACTAG-TGACTAG-TGACTAG | Design primers |
| 738886 | CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA-CTGGTGA | Design primers |
| 739055 | TGGTAGCTGGTGAC-TGGTAGCTGGTGAC-TGGTAGCTGGTGAC-TGGTAGCTGGTGAC-TGGTAGCTGGTGAC-TGGTAGCTGGTGAC | Design primers |
| 739140 | GGTAGCT-GGTAGCT-GGTAGCT-GGTAGCT-GGTAGCT-GGTAGCT | Design primers |
| 1063828 | CCCCCCTGCTCGA-CCCCCCTGCTCGA-CCCCCCTGCTCGA-CCCCCCTGCTCGA-CCCCCCTGCTCGA | Design primers |
| 1112185 | CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA | Design primers |
| 1112369 | AATCACC-AATCACC-AATCACC-AATCACC | Design primers |
| 1235134 | CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA | Design primers |
| 1304660 | GTCACCA-GTCACCA-GTCACCA-GTCACCA-GTCACCA-GTCACCA | Design primers |
| 1349872 | GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT-GGTCACT | Design primers |
| 1350104 | GACACTG-GACACTG-GACACTG-GACACTG-GACACTG-GACACTG-GACACTG-GACACTG-GACACTG-GACACTG-GACACTG-GACACTG | Design primers |
| 1350189 | ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG-ACAAATG | Design primers |
| 1591716 | TGGTGAC-TGGTGAC-TGGTGAC-TGGTGAC-TGGTGAC-TGGTGAC-TGGTGAC | Design primers |
| 1591766 | AGTGACA-AGTGACA-AGTGACA-AGTGACA-AGTGACA-AGTGACA-AGTGACA-AGTGACA | Design primers |
| 1591839 | GACAAGG-GACAAGG-GACAAGG-GACAAGG | Design primers |
| 1607965 | CGAAACCGGCGGCAG-CGAAACCGGCGGCAG-CGAAACCGGCGGCAG-CGAAACCGGCGGCAG-CGAAACCGGCGGCAG-CGAAACCGGCGGCAG-CGAAACCGGCGGCAG-CGAAACCGGCGGCAG-CGAAACCGGCGGCAG | Design primers |
| 1608101 | AAAACCGGCGGCAGC-AAAACCGGCGGCAGC-AAAACCGGCGGCAGC-AAAACCGGCGGCAGC-AAAACCGGCGGCAGC | Design primers |
| 1608192 | AAACCCGCGGCAGCG-AAACCCGCGGCAGCG-AAACCCGCGGCAGCG | Design primers |
| 1611784 | AGGTTCA-AGGTTCA-AGGTTCA-AGGTTCA-AGGTTCA-AGGTTCA-AGGTTCA | Design primers |
| 1611834 | GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA-GTGACAA | Design primers |
| 2034831 | TTGTCAC-TTGTCAC-TTGTCAC-TTGTCAC-TTGTCAC | Design primers |
| 2037625 | TCACTTA-TCACTTA-TCACTTA-TCACTTA-TCACTTA-TCACTTA | Design primers |
| 2114313 | ACAACCAA-ACAACCAA-ACAACCAA | Design primers |
| 2372255 | GAGGCCAAACCT-GAGGCCAAACCT-GAGGCCAAACCT | Design primers |
| 2372294 | GCCAAACCGGAA-GCCAAACCGGAA-GCCAAACCGGAA-GCCAAACCGGAA-GCCAAACCGGAA-GCCAAACCGGAA-GCCAAACCGGAA | Design primers |
| 2372384 | CCGGAAGCCAAA-CCGGAAGCCAAA-CCGGAAGCCAAA | Design primers |
| 2372421 | CGGAAGCCAAGC-CGGAAGCCAAGC-CGGAAGCCAAGC-CGGAAGCCAAGC-CGGAAGCCAAGC-CGGAAGCCAAGC-CGGAAGCCAAGC | Design primers |
| 2372516 | CCGGAAGCCAAG-CCGGAAGCCAAG-CCGGAAGCCAAG-CCGGAAGCCAAG-CCGGAAGCCAAG-CCGGAAGCCAAG-CCGGAAGCCAAG-CCGGAAGCCAAG-CCGGAAGCCAAG | Design primers |
| 2411451 | TCTCTGTGG-TCTCTGTGG-TCTCTGTGG-TCTCTGTGG-TCTCTGTGG | Design primers |
| 2456272 | ACCAATC-ACCAATC-ACCAATC-ACCAATC-ACCAATC | Design primers |
| 2521827 | CCTTGGT-CCTTGGT-CCTTGGT-CCTTGGT | Design primers |
| 2521863 | CTTGTCA-CTTGTCA-CTTGTCA-CTTGTCA-CTTGTCA-CTTGTCA-CTTGTCA | Design primers |
| 2603200 | CACCAGT-CACCAGT-CACCAGT-CACCAGT-CACCAGT-CACCAGT-CACCAGT-CACCAGT-CACCAGT-CACCAGT-CACCAGT-CACCAGT-CACCAGT-CACCAGT | Design primers |
| 2709281 | TCGGCTACCGGT-TCGGCTACCGGT-TCGGCTACCGGT-TCGGCTACCGGT-TCGGCTACCGGT-TCGGCTACCGGT-TCGGCTACCGGT-TCGGCTACCGGT-TCGGCTACCGGT-TCGGCTACCGGT-TCGGCTACCGGT | Design primers |
| 2709443 | ACCGGTTCAGCG-ACCGGTTCAGCG-ACCGGTTCAGCG-ACCGGTTCAGCG-ACCGGTTCAGCG-ACCGGTTCAGCG | Design primers |
| 2764199 | ACCGGTTCTTCCACT-ACCGGTTCTTCCACT-ACCGGTTCTTCCACT | Design primers |
| 2764245 | CCGGTTCTTCCACCA-CCGGTTCTTCCACCA-CCGGTTCTTCCACCA-CCGGTTCTTCCACCA-CCGGTTCTTCCACCA | Design primers |
| 2764321 | CGGCTCTTCCACCAC-CGGCTCTTCCACCAC-CGGCTCTTCCACCAC-CGGCTCTTCCACCAC-CGGCTCTTCCACCAC-CGGCTCTTCCACCAC | Design primers |
| 2764412 | GGTTCTTCCACCACC-GGTTCTTCCACCACC-GGTTCTTCCACCACC-GGTTCTTCCACCACC-GGTTCTTCCACCACC-GGTTCTTCCACCACC | Design primers |
| 2797422 | GACCAGT-GACCAGT-GACCAGT-GACCAGT-GACCAGT-GACCAGT-GACCAGT-GACCAGT-GACCAGT | Design primers |
| 3064780 | GTGATTG-GTGATTG-GTGATTG-GTGATTG-GTGATTG | Design primers |
| 3445662 | CCAGTCA-CCAGTCA-CCAGTCA-CCAGTCA-CCAGTCA-CCAGTCA | Design primers |
| 3626674 | GTCCTTG-GTCCTTG-GTCCTTG-GTCCTTG-GTCCTTG-GTCCTTG-GTCCTTG-GTCCTTG-GTCCTTG-GTCCTTG-GTCCTTG-GTCCTTG-GTCCTTG | Design primers |
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