Microsatellites /Tandem Repeats database

Genome: Thermosynechococcus elongatus BP-1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
109569GGTAGGGGTTAGGGGGCAGGGGGTCGGGGGDesign primers
304561TTTTTTGTTTTTTTCTGTTTTTTATTCTTTTDesign primers
691529TGGAGCAGGGAT-TACAGCAGGGAT-TACAGCAGGGAT-TDesign primers
694214AAGGATTGCAACAGGGATTGCAACAAGGATTACAGCADesign primers
694270CAACAGGGATTGCAACAGGGACTGCAACAAGGACTGDesign primers
904431GAAGGCCCACATGAAGGCGCACATGAAGGTCAACATDesign primers
958062CTCGCCAAACT-AACGCCAAACT-AACGCCAAACTDesign primers
1309391CTCCCCCCTGCTCCCCCAGGATCACCCCTGCDesign primers
1563933CC-CC-CA-GC-CC-CA-CA-CC-CA-CT-CC-CA-CDesign primers
1569831TTGCAGCAGGGATTGCAACAGGGATTGCAACAAGGADesign primers
1680983TGCAGTTTCAGTGGCAGTTGCAGTTGDesign primers
1729174GTTCAGAGGTGTTCACAGGTCTTCAAAGGTDesign primers
1995080GTTCACCGCGTTCACCGTATTCACCCCGCTCACCGTATTCACCCCGTTCACCGCGDesign primers
2350527TTGCCGATGCCGTAGCCGTTGCCGDesign primers
2387614ATGGCGATGGTGATGGCCGTGGCGATCGCGDesign primers
2420764AAGGAAACCGAACGCCGCTTTCAAGAAACGGAACGTCGCTTTCAAGAAACGGAGCGCCGCTTTDesign primers
2548013CCCCACCCCCCCCGCCACCACCACDesign primers

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