This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 8956 | GATTTTTGTCTCTGCAGGT-GGTTTTTGTCTCTGCAGGT-GGTTTTTGTCTCTGCAGGT-GGTTTTTGTCTCTGCAGGT | Design primers |
| 101420 | CATAGGACAA-TATAGGACAA-TATAGGACAA | Design primers |
| 103845 | TAGGGAAAA-TAGGGAAAA-TAGGGAAAA | Design primers |
| 126762 | ATCGGTTATTATCTGTTATTGTCGGTTATT | Design primers |
| 155929 | CGGCGAAAC-TGGCGAAAC-TGGCGAAAC-TGGCGAAAC-TGGCGAAAC-TGGCGAAAC-TGGCGAAAC-TGGCGAAAC-TGGCGAAAC-TGGCGAAAC-TGGCGAAAC-TGGCGAAAC | Design primers |
| 257168 | GCTGTCG-GCTGTCG-GCTGTCG-GCTGTCG | Design primers |
| 410351 | GAGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC | Design primers |
| 514650 | AGGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT | Design primers |
| 613764 | AAACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA | Design primers |
| 613952 | GCCAG-CACAG-CACAG-CACAG-CACAG-CACAG-CACAG-CACAG-CACAG-CACAG-CACAG-CACAG | Design primers |
| 639797 | CTGCTGCATTTG-CTGCTGCATTTG-CTGCTGCGTTTG-CTGCTGCGTTTG | Design primers |
| 794633 | CCTCAGGCACAAAATGCCTCTCAGGCACAAAATGCCCCTCAGGCACAAAATGCTCCTCAGGCACAAAATGCT | Design primers |
| 928553 | TGATCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC | Design primers |
| 928650 | AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC | Design primers |
| 1390299 | GACTGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG | Design primers |
| 1425932 | CTACAAAAAACAACAAAAAACAACAAAAAA | Design primers |
| 1520022 | TGAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG | Design primers |
| 1591885 | GTCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA | Design primers |
| 1706655 | CCGGTATTAACC-TCGGTATTAACC-TCGGTATTAACC | Design primers |
| 1720977 | GGTAGTAGTA-AGTAGTAGTA-AGTAGTAGTA-AGTAGTAGTA | Design primers |
| 1721018 | GTAGTAGTTG-GTAGTAGTTG-GTAGTAGTTG-GTAGTAGTTG | Design primers |
| 1723062 | CTTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT | Design primers |
| 1814038 | GCCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA | Design primers |
| 1878845 | AAAAAAAACTGAAGAGGA-TAAAAAAACTGAAGAGGA-TAAAAAAACTGAAGAGGA-TAAAAAAACTGAAGAGGA | Design primers |
| 2154752 | ACAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG | Design primers |
| 2229618 | TTTCACT-ATTCACT-ATTCACT-ATTCACT-ATTCACT-ATTCACT-ATTCACT-ATTCACT | Design primers |
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