Microsatellites /Tandem Repeats database

Genome: Bacillus sp. 1NLA3E

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
826974GACATA-GTCATA-GTCATA-GTCATA-GTCATA-GTCATADesign primers
1111116TGCGGCTTTGGTTTGTGT-GGCGGCTTTGGTTTGTGT-GGCGGCTTTGGTTTGTGT-GGCGGCTTTGGTTTGTGT-GGCGGCTTTGGTTTGTGT-GGCGGCTTTGGTTTGTGTDesign primers
1111341GTCGGTGCGGCGGTTGTTGTCGGTGCAGCGGTTGTTGTCGGTGCTGCGGTTGTTDesign primers
1111416GGTGCCGCTGTTGTCGTCGGTGCCGCTGTTGTCGTTGGTGCGGCTGTTGTCGTCGGTGCCGCTGTTGTTGTCDesign primers
1112226GGCGCTGCTGTTGTCGTCGGCGCTGCTGTTGTCGTTGGTGCTGCTGTTGTCGTCDesign primers
1112281GTGCGGCTGTTGTCGTCG-GTGCGGCTGTTGTCGTCG-GTGCGGCCGTTGTCGTCG-GTGCGGCCGTTGTCGTCGDesign primers
1112466GCTGTTGTCGTTGGTGCG-GCTGTTGTCGTCGGTGCG-GCTGTTGTCGTCGGTGCG-GCTGTTGTCGTCGGTGCG-GCTGTTGTCGTCGGTGCGDesign primers
1703697GAGTCGAGTATAAAACCTGAGAGTCGAGCATAAAACCTGGGAGTCGAGCATAAAATCTGAGAGTCAAGCATAAAACCTGADesign primers
1951383ACTTTTCGAGATATATGCTCGACTTTTCGAGATATATGCTCAACTTTTCAGGATATATGCTCGACTTTTCGATATATATGCTCADesign primers
1951469TTTTCAGGATGTATGCTCGACTTTCAGGATATATGCTCGACTTTCAGAATGTATGCTCGADesign primers
2014514AGGGATTAAAAGAGGGATTACAAGAAGGATTAAAAGDesign primers
2068818GTCCCCGTGCT-CTCCCCGTGCT-CTCCCCGTGCT-CTCCCCGTGCTDesign primers
2189078GACGTTCAAGCCGCCGTTCAAGCCGCCGTTCAAGCCDesign primers
2189119TCAAGCCGCCGTTCAAGCCATCGT-TCAAGCCGCCGTTCAAGCCATCGT-TCAAGCCGCCGTTCAAGCCGCCGTDesign primers
2189338AGCCGCCGTTCAAGCCGCCGTTCGAGCCGTCGTTCADesign primers
2189401CGTCGTTCAAGCCGCTGTTCGAGCCGTCGTTCAAACCGCCGTTCGAGCCGTCGTTCAAGCCGCCGTTCGAGCDesign primers
2189483GTCGTCGTTCAAGCCGTCGTTCAGGCCGTCGTTCGAGCCGTCGTTCAGGCCGTCGTTCAAGCCGCCGTTCAGDesign primers
2612053TTTAATTTTTTGCCGATATATTTGATTTTTTGCTGATATATTTGGTTTTTTGCCGATATADesign primers
2768795TGTTGATTATTATTTTGATTATTATTTTGATTATTADesign primers
2769224TTA-TTG-TTG-TTA-TTG-TTG-TTG-TTA-TTA-TTG-TTG-TTGDesign primers
2771505CTCGTCGCTCTTCTCGCCGCTCTTCTCGTCGCTCTTCTCGTCGCTCTTDesign primers
2771621TCTACTCGTCGCTCTTCTCGTCGCTCTACTCGTCGGDesign primers
2771673CCCGTCGCTCTA-CCCGTCGCTCTT-CTCGTCGCTCTA-CTCGTCGCTCTA-CCCGTCGCTCTA-CTCGTCGCTCTADesign primers
2771746TCGCCGCTCTACTCGTCGGTCTACTCGCCGCTCTACTCGCCGCTCTACTCGTCGCTCTACTCGCCGGTCTACTCGTCGCTCTACTCGCCGGTCTACTCGTCGCACTACTCGTCGGTCTACDesign primers
2772137AGCAGTTCGCGGCGTAGCAGTTCTCGGCGTAGCAGTTCTCGGCGTDesign primers
2772242AGCAGTTCTCGGCGC-AGCAGTTCACGGCGC-AGCAGTTCACGGCGC-AGCAGTTCACGGCGCDesign primers
2778704TTCTAA-TTCTAA-TTCTAA-TTCTAA-TTCTAADesign primers
4665114ACTCGACTTTTCGAGATATAT-GCTCGACTTTTCGAGATTTAT-GCTCGACTTTTCGAGATTTAT-GCTCGACTTTTCGAGATTTATDesign primers

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