Microsatellites /Tandem Repeats database

Genome: Erwinia sp. Ejp617

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
622256GAATCAGGC-GAATCAGGC-GAATCAGGC-GAATCAGGCDesign primers
1010898ATTTTGAGTTTA-ATTTTGAGTTTA-ATTTTGAGTTTA-ATTTTGAGTTTADesign primers
1044967GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTG-GTTCTGDesign primers
1196221GGAATGAT-GGAATGAT-GGAATGAT-GGAATGAT-GGAATGAT-GGAATGATDesign primers
1209013AGGGTAG-AGGGTAG-AGGGTAG-AGGGTAG-AGGGTAGDesign primers
2044142CTTGTTT-CTTGTTT-CTTGTTT-CTTGTTTDesign primers
2045237ATTATCTGC-ATTATCTGC-ATTATCTGCDesign primers
2167495ACAATCAAA-ACAATCAAA-ACAATCAAADesign primers
2673609ATTGGT-ATTGGT-ATTGGT-ATTGGTDesign primers
2780714TGTGC-TGTGC-TGTGC-TGTGC-TGTGC-TGTGCDesign primers
2783180ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGAT-ACTGATDesign primers
2802735TTCAACCGCCGGAGCTGC-TTCAACCGCCGGAGCTGC-TTCAACCGCCGGAGCTGCDesign primers
2802933TTCAACCGCCGGAGCTGC-TTCAACCGCCGGAGCTGC-TTCAACCGCCGGAGCTGCDesign primers
3720947GAACTATCC-GAACTATCC-GAACTATCCDesign primers
3804531CTGTCCGTTG-CTGTCCGTTG-CTGTCCGTTG-CTGTCCGTTGDesign primers
3804572TGTCCGTCAC-TGTCCGTCAC-TGTCCGTCAC-TGTCCGTCACDesign primers

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