This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 338969 | AGATTATGATGATTTGAGGGT-TAATTATGATGATTTGAGGGT-TAATTATGATGATTTGAGGGT-TAATTATGATGATTTGAGGGT-TAATTATGATGATTTGAGGGT-TAATTATGATGATTTGAGGGT | Design primers |
| 358401 | GGTTTGAGAGATCGCATG-TGTTTGAGAGATCGCATG-TGTTTGAGAGATCGCATG | Design primers |
| 390927 | GAATGATT-GAATGATT-GAATGATT | Design primers |
| 390984 | ATGATTGA-ATGATTGG-ATGATTGG-ATGATTGG-ATGATTGG-ATGATTGG | Design primers |
| 391110 | TAATGATATGTTTTAATG-AAATGATATGTTTTAATG-AAATGATATGTTTTAATG-AAATGATATGTTTTAATG | Design primers |
| 479331 | GCATGCAAAGTT-TCATGCAAAGTT-TCATGCAAAGTT | Design primers |
| 487184 | ACTTTTTTTTTTGAAC-TCTTTTTTTTTTGAAC-TCTTTTTTTTTTGAAC | Design primers |
| 487234 | TTTTTTTTTGAACTCT-TTCTTTTTTGAACTCT-TTCTTTTTTGAACTCT-TTCTTTTTTGAACTCT-TTCTTTTTTGAACTCT | Design primers |
| 600041 | TTGGCGGAG-TTGGCGGAG-TTGGCGGAG-TTGGCGGAG | Design primers |
| 648697 | GGCAAAATACGATGATCTCAC-AGGAAAATACGATGATCTCAC-AGGAAAATACGATGATCTCAC-AGGAAAATACGATGATCTCAC-AGGAAAATACGATGATCTCAC-AGGAAAATACGATGATCTCAC-AGGAAAATACGATGATCTCAC-AGGAAAATACGATGATCTCAC-AGGAAAATACGATGATCTCAC-AGGAAAATACGATGATCTCAC-AGGAAAATACGATGATCTCAC | Design primers |
| 651685 | TTTGCGCGATTT-TTTGCGCGATTT-TTTGCGCGCTTT | Design primers |
| 823974 | TTTTAATTCTGT-GTTTAATTCTGT-GTTTAATTCTGT | Design primers |
| 834026 | GTTTAAATTGTC-TATTAAATTGTC-TATTAAATTGTC-TATTAAATTGTC-TATTAAATTGTC-TATTAAATTGTC-TATTAAATTGTC-TATTAAATTGTC | Design primers |
| 841293 | TATTAAAATTATCTTAAAATTATCTTAAAATTA | Design primers |
| 878657 | TTTTAATTCTGT-GTTTAATTCTGT-GTTTAATTCTGT | Design primers |
| 1003089 | AGAGGTGGTGTGATAT-AGAAGTGGTGTGATAT-AGAAGTGGTGTGATAT-AGAAGTGGTGTGATAT | Design primers |
| 1053815 | TAGAAACCCCAC-AAGAAACCCCAC-AAGAAACCCCAC | Design primers |
| 1318900 | TTATTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG | Design primers |
| 1366042 | GGAATAAAGAATAAA-AGAATAAAGAATAAA-AGAATAAAGAATAAA-AGAATAAAGAATAAA | Design primers |
| 1366103 | GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA | Design primers |
| 1371136 | AATAAAACATATCATTTC-ATTAAAACATATCATTTC-ATTAAAACATATCATTTC-ATTAAAACATATCATTTC | Design primers |
| 1371291 | GCATCCAA-TCATCCAA-TCATCCAA-TCATCCAA-TCATCCAA-TCATCCAA | Design primers |
| 1371383 | CAATCATT-CAATCATT-CAATCATT | Design primers |
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