Microsatellites /Tandem Repeats database

Genome: Bifidobacterium animalis subsp. lactis CNCM I-2494

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
110209GCAGAGTT-GCAGAGTT-GCAGAGTTDesign primers
110234CGGATTTG-CGGATTTG-CGGATTTGDesign primers
179943GCAGATAGG-GCAGATAGG-GCAGATAGGDesign primers
198828CGGAGGCAA-CGGAGGCAA-CGGAGGCAA-CGGAGGCAADesign primers
254593CTGTTGTTGCTGCCGTTGTTGCTGCCGTTGTTGCTGDesign primers
258493TTTTACGCAGACGG-ATTTACGCAGACGG-ATTTACGCAGACGGDesign primers
284595GCGCGCGAGGGCGTGCGAGGGCGCGCGGGGDesign primers
296169GCGCTAATGCTTACGGGATGTCGTTAATGCTTACGGGATGTCGTTAATGCTTACGGGATGDesign primers
332033CGCGGTGGTTGCGCCAGGGT-GCCGGTGGTTGCGCCAGGGT-GCCGGTGGTTGCGCCAGGGTDesign primers
333818AGGGGTAGAGGGGGGTAGAGAGGGGTAGAGDesign primers
336353AAGAAAGGC-AAGAAAGGC-AAGAAAGGCDesign primers
509397GGTGGATTG-GGTGGATTG-GGTGGATTGDesign primers
542641AGGTCGCGCACAGATCGCGCACAGATCGCGCACDesign primers
627072GCAGATTG-GCAGATTG-GCAGATTGDesign primers
770178TCGCCGTCGCAG-TCGCCGTCGCAG-TCGCCATCGCAGDesign primers
1328833CATCACTTGGACATCACCTGGACATCACTTGGADesign primers
1349904ATATTTCA-ATATTTCA-ATATTTCADesign primers

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