This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 174873 | GAATAGA-TTATAGA-TTATAGA-TTATAGA-TTATAGA-TTATAGA-TTATAGA-TTATAGA-TTATAGA | Design primers |
| 593382 | TTTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG | Design primers |
| 605831 | ATAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA | Design primers |
| 625287 | TATATTGG-TATATTGG-TATATTGG | Design primers |
| 687405 | TTAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA | Design primers |
| 764599 | TTAAGTGATAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA | Design primers |
| 766853 | GTATTGATTAAGTATTTATTAAGTATTGAATAA | Design primers |
| 792519 | CTCAAGTATTTCTATAGA-TTCAAGTATTTCTATAGA-TTCAAGTATTTCTATAGA | Design primers |
| 1107741 | TTGTGTGT-TTGTGTGT-TTGTGTGT | Design primers |
| 1190439 | CTT-CTT-TTT-CTT-CTT-TTT-CTT-CTT-TTT | Design primers |
| 1533418 | TTATAATTAAACAACTTGTAATTAAACAACTTGTAATTAAACAAC | Design primers |
| 2264424 | ATTTTTTTAAATTCTTTTAAATTTTTTTTA | Design primers |
| 2473313 | TCATAAAATCCTTATTTTAATAAAATCCTTATTTTAATAAAATCCTTATTT | Design primers |
| 2511393 | ACATAATAAAACATAACAAAACATTATAAAACATAACAAA | Design primers |
| 3055687 | TTTTTTGTAAT-CTTTTTGTAAT-CTTTTTGTAAT | Design primers |
| 3076642 | TTTTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT | Design primers |
| 3095547 | TTATTTTCTATTTATTTTCTCTTTATTTTCCAT | Design primers |
| 3424352 | TT-TA-AG-CT-TT-TA-TA-TT-TT-TT-AA-AC-TT-TT-AT-AT-TT-TT-TA-AA-CT-TT-TA-TA-TT-T | Design primers |
| 3519441 | AATTTTC-TATCTTC-TATCTTC-TATCTTC-TATCTTC-TATCTTC-TATCTTC-TATCTTC-TATCTTC | Design primers |
| 3735822 | GTTGCTCCG-GTTGCTCCG-GTTGCTCCG | Design primers |
| 3924394 | TCTTCATAT-TCTTCATAT-TCTTCATAT | Design primers |
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