Microsatellites /Tandem Repeats database

Genome: Helicobacter pylori ELS37

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
126454TTGTCTTTTGTTTTTCTTGTT-CTGTCTTTTGTTTTTCTTGTT-CTGTCTTTTGTTGTTCTTGTTDesign primers
126550TTGTCTTTTGTTTTTCTTGTT-CTGTCTTTTGTTTTTCTTGTT-CTGTCTTTTGTTGTTCTTGTTDesign primers
173279TTCTTTAACCTCTTCTTTAGCCTCTTCTTTAGCCTCDesign primers
260747TATTGATGATTTGAGGGTTAA-TTATGATGATTTGAGGGTTAA-TTATGATGATTTGAGGGTTAA-TTATGATGATTTGAGGGTTAADesign primers
310733GTTGCTTG-GTTGCTTG-GTTGCTTG-GTTGCTTGDesign primers
310779TGAATGAT-AGAATGAT-AGAATGAT-AGAATGAT-AGAATGAT-AGAATGATDesign primers
310834TTGATTGC-TTGAATGG-TTGAATGG-TTGAATGG-TTGAATGG-TTGAATGG-TTGAATGG-TTGAATGG-TTGAATGG-TTGAATGG-TTGAATGG-TTGAATGGDesign primers
482961CTATATTTATTTGAACAATATTTATTTGAACAATATTTATTTGAADesign primers
669078ATTATGATGATTTGAGAGCCG-ATTATAATAATTTGAGAGCCG-ATTATAATAATTTGAGAGCCG-ATTATAATAATTTGAGAGCCG-ATTATAATAATTTGAGAGCCG-ATTATAATAATTTGAGAGCCGDesign primers
702221ATTTTTGGTGAGATCATCGTATTTTTTGGTGAGTTCATCGTATTTTTTGGTGAGTTCATCGTADesign primers
1033562TGATTATTTTAT-TGATTATTTTAT-TGACTATTTTAT-TGATTATTTTAT-TGATTATTTTTT-TGATTATTTTTTDesign primers
1246274AAGATTAAATGAATATTAAATGAAGATTAAATCDesign primers
1254354TTTAATGAAATCTTTCTGTTC-TTTAACCAAATCTTTCTGTTC-TTTAACCAAATCTTTCTGTTC-TTTAACCAAATCTTTCTGTTCDesign primers
1314002TTTAAAAAGAGAGTTTAAAAAAGAGAGTTTAAAAAAGAGAGTDesign primers
1327005GCATGCCGATTAAAT-GCATGCTGATTAAAT-GCATGCTGATTAAAT-GCATGCTGATTAAATDesign primers
1377436ATTATGTA-TTTATGTA-TTTATGTA-TTTATGTA-TTTATGTA-TTTATGTA-TTTATGTA-TTTATGTADesign primers
1441988GATTATAGGCTGTTTC-AATTATAGGCTGTTTC-AATTATAGGCTGTTTCDesign primers
1453946GGCATTCA-ACCATTCA-ACCATTCA-ACCATTCA-ACCATTCA-ACCATTCA-ACCATTCA-ACCATTCA-ACCATTCA-ACCATTCA-ACCATTCA-ACCATTCADesign primers
1454055TCAATCAT-TCTATCAT-TCTATCAT-TCTATCAT-TCTATCAT-TCTATCATDesign primers
1454124CAACCAAG-CAACCAAG-CAACCAAG-CAACCAAGDesign primers
1482850GCTAAG-TCTAAG-TCTAAG-TCTAAG-TCTAAG-TCTAAGDesign primers
1573735AATTTTC-AATTTTC-AATTTTC-AATTTTCDesign primers
1615249CAAA-AAAG-AAAG-CAAG-AAAG-AAAG-CAAG-AAAG-AAAGDesign primers
1663114TTTAGTG-ATTAGTG-ATTAGTG-ATTAGTG-ATTAGTG-ATTAGTGDesign primers
1664482GAAGTGA-TTAGTGA-TTAGTGA-TGAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGADesign primers

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