Microsatellites /Tandem Repeats database

Genome: Arthrobacter phenanthrenivorans Sphe3

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
28431GTCCTT-GTCCTT-GTCCTT-GTCCTTDesign primers
415535CATAGCCTCCAAAG-CCTAGCCTCCAAAG-CCTAGCCTCCAAAG-CCTAGCCTCCAAAG-CCTAGCCTCCAAAG-CCTAGCCTCCAAAG-CCTAGCCTCCAAAG-CCTAGCCTCCAAAG-CCTAGCCTCCAAAG-CCTAGCCTCCAAAG-CCTAGCCTCCAAAGDesign primers
629609GACAAG-GACAAG-GACAAG-GACAAGDesign primers
817048ACACACACACC-ACCCACACACC-ACCCACACACC-ACCCACACACCDesign primers
919385CCCCTTGCCGCTGTTCCCCGTGCCGCTGTTCCCCGTGCCGCTGTTDesign primers
1265466CCTGTG-GCTGTG-GCTGTG-GCTGTG-GCTGTG-GCTGTG-GCTGTG-GCTGTGDesign primers
1556718GCACCCAAGCAGGAGGCACCAAAGCAGGAGGCACCCAAGCAGGAADesign primers
2024073TTTTGTAGGCGGCTCA-GTTTGTAGGCGGCTCA-GTTTGTAGGCGGCTCADesign primers
2776114TGGTGGGCCTGGTTCTGGTGGCCCTGGTTCTGGTGGGCCTGGTTCTGGTGGGCCTGGTTCDesign primers
3405205TGGAGTTGTCCGTGGAGTTATCCGTGGAGTTGTCCGDesign primers
3679048CGGGCACTGCCCGGTCACTGCCCGGTCACTGCCDesign primers
4163194GCC-GGC-AAC-GGC-GGC-GGC-GGC-GGC-GGA-AAC-GGC-GGC-GGC-GGC-GGC-GGA-AAC-GGC-GGC-GGC-GGCDesign primers
4163358CGGCGGCGGCGGCAACGGCGGCGGCGGCGGCAACAACGGCGGCGGCGGCGGCAACAACGGCGGDesign primers
4163516GCGGCGGCGGCAACA-ACGGCGGCGGCAACA-ACGGCGGCGGCAACADesign primers
4163668GACGGCGGCAACGGCGGCGGCAACGGCGGCGGCAACDesign primers
4163803AACGACGGCGGC-AACGGCGGCGGC-AACGGCGGCGGC-AACGGCGGCGGCDesign primers

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