Microsatellites /Tandem Repeats database

Genome: Alicycliphilus denitrificans BC

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
53068CAGGGC-CAGGGC-CAGGGC-CAGGGCDesign primers
362573GCCGCCGCG-GCCGCCGCG-GCCGCCGCGDesign primers
1131244TGG-CGG-CGG-CGG-CGG-CGG-CGG-CGG-CGG-CGG-CGG-CGG-CGG-CGG-CGG-CGGDesign primers
1915649GCACCC-GCACCC-GCACCC-GCACCCDesign primers
2232252CGATGG-CGATGG-CGATGG-CGATGGDesign primers
2845534TCGTGATGA-TCGTGATGA-TCGTGATGADesign primers
2922765CCCGC-ATCGC-ATCGC-ATCGC-ATCGC-ATCGC-ATCGC-ATCGC-ATCGC-ATCGC-ATCGC-ATCGCDesign primers
3039683CGG-CGG-CGG-CGG-CGG-CGG-CGG-CGGDesign primers
3330473GCC-GCC-ACC-GCC-ACC-GCC-ACC-GCC-ACC-GCC-ACC-GCCDesign primers
3335559GGCGGCAGAGGACGGCAGAGGGCGGCACAGDesign primers

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