This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 1477 | ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA | Design primers |
| 32041 | AGAAGAAGGTATAAAAGAAGGTATAAAAGAAGGTAT | Design primers |
| 415544 | GTTTA-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT-GTGTT | Design primers |
| 456037 | GAAAATTTGGATAATAATAACAATAATTTGGATAATAATAACAATAATTTGGATAATAATAAC | Design primers |
| 542373 | TTTAT-GTTCT-GTTCT-GTTCT-GTTCT-GTTCT-GTTCT-GTTCT-GTTCT-GTTCT-GTTCT-GTTCT | Design primers |
| 565579 | ATGAACA-ACCAACA-ACCAACA-ACCAACA-ACCAACA-ACCAACA-ACCAACA-ACCAACA-ACCAACA | Design primers |
| 655528 | TGTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTC | Design primers |
| 683054 | TTAT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT | Design primers |
| 687743 | GGACTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT-TGATTGT | Design primers |
| 691097 | AGGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG-TTGACTG | Design primers |
| 729564 | TTTCTT-TTTCTT-TTTCTT-TTTCTT-TTTCTT | Design primers |
| 978787 | AACAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA | Design primers |
| 982450 | TATT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT | Design primers |
| 1005061 | GAAGAAGGTATT-AAAGAAGGTATT-AAAGAAGGTATT | Design primers |
| 1020294 | TTTTTATCT-TTTTTATCT-TTTTTATCT | Design primers |
| 1242014 | AGTGC-GGTGC-GGTGC-GGTGC-GGTGC-GGTGC-GGTGC-GGTGC | Design primers |
| 1338685 | AAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG | Design primers |
| 1488583 | CCCCTTGTTCTA-TACCTTGTTCTA-TACCTTGTTCTA-TACCTTGTTCTA-TACCTTGTTCTA-TACCTTGTTCTA-TACCTTGTTCTA-TACCTTGTTCTA | Design primers |
| 1683354 | AATTTAATGGTAAAATTAATGGTAAAATTAATGGTA | Design primers |
| 1952127 | AG-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG | Design primers |
| 1960782 | AG-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG-TT-TG | Design primers |
| 1963894 | AGGCTTG-TTGCTTG-TTGCTTG-TTGCTTG-TTGCTTG-TTGCTTG-TTGCTTG-TTGCTTG-TTGCTTG | Design primers |
| 2013610 | AAAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG | Design primers |
| 2051155 | ATCAAAATATT-ATCAAAATATT-ATCAAAAAATT | Design primers |
| 2264510 | AATAATAAATAATAATAATTAATAATAAAG | Design primers |
| 2653303 | TATTTCAAA-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG-TATTTCAAG | Design primers |
| 2711329 | TAATG-CGATG-CGATG-CGATG-CGATG-CGATG-CGATG-CGATG-CGATG-CGATG-CGATG-CGATG-CGATG-CGATG-CGATG-CGATG | Design primers |
| 2863647 | ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT | Design primers |
|
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