Microsatellites /Tandem Repeats database

Genome: Campylobacter jejuni subsp. doylei 269.97

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
38869TAAATATTTATATAAATATTTACACAAATATTTATADesign primers
75512CCTAACACT-CCTAACACT-CCTAACACTDesign primers
283284TTATAAATA-ATATAAATA-ATATAAATA-ATATAAATA-ATATAAATA-ATATAAATA-ATATAAATA-ATATAAATADesign primers
860500CCCTCATTTATC-ACCTCATTTATC-ACCTCATTTATCDesign primers
861994TGTAGTGAAAG-TGTAGTGAAAG-TATAGTGAAAGDesign primers
862146AAGTTGTAGTTAAGTTGTAGTGAAATTGTAGTTDesign primers
984835TTATAAATA-ATATAAATA-ATATAAATA-ATATAAATA-ATATAAATA-ATATAAATADesign primers
1002458AAAAAAAAGG-TAAAAAAAGG-TAAAAAAAGGDesign primers
1006833AATAATTTAT-TATGATTTAT-TATGATTTAT-TATGATTTAT-TATGATTTAT-TATGATTTATDesign primers
1006941TTAAAAGAATGATTGCAAG-CTAAAAGAATGATTGCAAG-CTAAAAGAATGATTGCAAGDesign primers
1122764GTATAAATATTTGTGTAAATATTTATATAAATATTTDesign primers
1214686TTATCTTTTATTATCATTTATTATCATTTADesign primers
1350566GTATAAATATTTGTGTAAATATTTATATAAATATTTDesign primers
1638242ATAAATAATATATAAATAAGATAAAAATAATATDesign primers

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