This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 16412 | TGGCGG-TGGCGG-TGGCGG-TGGCGG-TGGCGG | Design primers |
| 426326 | TCATACCTGGCATGCCCATTCCTC-CCATACCTGGCATGCCCATGCCTC-CCATACCTGGCATGCCCATGCCTC-CCATACCTGGCATGCCCATGCCTC-CCATACCTGGCATGCCCATGCCTC | Design primers |
| 459908 | TTTGAATGAGAAGAGTGATCG-TGTGAATGAGAAGAGTGATCG-TGTAAATGAGAAGAGTGATCG-TGTGAATGAGAAGAGTGATCG-TGTAAATGAGAAGAGTGATCG-TGTGAATGAGAAGAGTGATCG | Design primers |
| 537056 | TAATAATTAATTAATATTTAATTAATAATTATT | Design primers |
| 620275 | TTTATTTGACATTTTAGTTGACATTTTTTTTGACATTTTATTTGACTT | Design primers |
| 1145722 | GCTTTTTTTGTTTA-TCTTTTTTTGTTTA-TCTTTTTTTGTTTA | Design primers |
| 1294683 | CATTCCTGACATTCCTCC-CATTCCTGGCATTCCTCC-CATTCCTGGCATTCCTCC-CATTCCTGGCATTCCTCC-CATTCCTGGCATTCCTCC-CATTCCTGGCATTCCTCC | Design primers |
| 1303268 | ATTA-ATTA-ATTA-ATTA-ATTA-ATTA | Design primers |
| 1398131 | TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA | Design primers |
| 1642290 | AAAAAGTAG-AAAAAGTAG-AAAAAGTAG | Design primers |
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