This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
Position | Sequence | |
61364 | GGCTCG-GGCTGG-GGCTGG-GGCTGG-GGCTGG-GGCTGG-GG | Design primers |
485082 | AATTTCT-AATTTCT-AATTTCT-AATTTCT-AA | Design primers |
829126 | TTCG-TTCG-TTCG-TTCG-TTCG-TTCG-TTC | Design primers |
829154 | ATCT-ATCT-ATCT-ATCT-ATCT-ATCT-ATCT-ATCT-ATC | Design primers |
1693945 | TACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTA | Design primers |
2845479 | CCGTTATTT-CCGTTGTTT-CCGTTGTTT-CCGTTGTTT-CCGTTGTTT-CCGTTGTTT-CCGTTGTTT-CCGTTGTTT-CCGTT | Design primers |
2845578 | CCGTTATTT-CCGTTATTT-CCGTTATTT-CCGTT | Design primers |
2845623 | CCGTTATTT-CCGTTATTT-CCGTTATTT-CCGTTATTT-CCGTT | Design primers |
2845710 | TTCCCGTTG-TTCCCGTTA-TTCCCGTTA-TTCCCGTTA-TTCCCGTTA-TTCCCGTTA-TTCCCGTT | Design primers |
2845776 | CCGTTATTTCCGTTATTCCCGTTATTCCCGTTATTCCCGTTATTTCCGTTATTTCCGT | Design primers |
3670704 | CTAAGAAAGCTACTAAAAAAGCTACTAAGAAAGCTGC | Design primers |
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