Microsatellites /Tandem Repeats database

Genome: Onion yellows phytoplasma

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
98592AAGGAATTAATACAATT-AAGGAATTAATACAATT-AAGGAATTAATACAATT-AAGGAATTAATACAATTDesign primers
170442ATTCAATAAAATAAT-ATTCAATAAAATAAT-ATTCAATAAAATAAT-ATTCAATAAAATAAT-ATTCAATAAAATAAT-ATTCAATAAAATAAT-ATTCAATAAAATAAT-ATTCAATAAAATAAT-ATTCAATAAAATAAT-ATTCAATAAAATAATDesign primers
239460TTTATTTTTG-TTTATTTTTG-TTTATTTTTGDesign primers
311212ATTTAGAAATT-ATTTAGAAATT-ATTTAGAAATT-ATTTAGAAATTDesign primers
379622AAAAACAAGAA-AAAAACAAGAA-AAAAACAAGAA-AAAAACAAGAADesign primers
420514AAAAACAAGAA-AAAAACAAGAA-AAAAACAAGAA-AAAAACAAGAADesign primers
506867AAAACTAA-AAAACTAA-AAAACTAADesign primers
514638AAAAAATACTAT-AAAAAATACTAT-AAAAAATACTATDesign primers
533222ATAATTATTTCAATTT-ATAATTATTTCAATTT-ATAATTATTTCAATTTDesign primers
609154AGAAAAAAACA-AGAAAAAAACA-AGAAAAAAACA-AGAAAAAAACADesign primers
797750TTGATTTGA-TTGATTTGA-TTGATTTGADesign primers

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