Microsatellites /Tandem Repeats database

Genome: Helicobacter pylori BM012A

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
0AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATT-AGTGATTDesign primers
5093TTCTTAAAG-TTCTTAAAG-TTCTTAAAGDesign primers
6638TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAGDesign primers
91536AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATA-AAGAATADesign primers
96482CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAATDesign primers
161867AACAAAAGACAGAACAAGAAA-AACAAAAGACAGAACAAGAAA-AACAAAAGACAGAACAAGAAA-AACAAAAGACAGAACAAGAAADesign primers
235266AGGGCGTGAAAG-AGGGCGTGAAAG-AGGGCGTGAAAGDesign primers
241888ATGAAAACA-ATGAAAACA-ATGAAAACADesign primers
280984ATAAATAC-ATAAATAC-ATAAATAC-ATAAATAC-ATAAATAC-ATAAATACDesign primers
341990TTTAATCTTA-TTTAATCTTA-TTTAATCTTA-TTTAATCTTA-TTTAATCTTA-TTTAATCTTADesign primers
396104AGAGTTAAAAAAAG-AGAGTTAAAAAAAG-AGAGTTAAAAAAAG-AGAGTTAAAAAAAG-AGAGTTAAAAAAAGDesign primers
660087TTTCTACATCTTGCGGTA-TTTCTACATCTTGCGGTA-TTTCTACATCTTGCGGTA-TTTCTACATCTTGCGGTA-TTTCTACATCTTGCGGTADesign primers
940266AAAATACGATGAACTCACAGG-AAAATACGATGAACTCACAGG-AAAATACGATGAACTCACAGG-AAAATACGATGAACTCACAGG-AAAATACGATGAACTCACAGG-AAAATACGATGAACTCACAGG-AAAATACGATGAACTCACAGG-AAAATACGATGAACTCACAGGDesign primers
1099775TTTCTTTTTTAAGAA-TTTCTTTTTTAAGAA-TTTCTTTTTTAAGAA-TTTCTTTTTTAAGAA-TTTCTTTTTTAAGAA-TTTCTTTTTTAAGAADesign primers
1121230TTTAATTCTGTG-TTTAATTCTGTG-TTTAATTCTGTGDesign primers
1288094GACAACGAAAAT-GACAACGAAAAT-GACAACGAAAAT-GACAACGAAAAT-GACAACGAAAAT-GACAACGAAAATDesign primers
1298099AGAAGTGGTGTGATAT-AGAAGTGGTGTGATAT-AGAAGTGGTGTGATAT-AGAAGTGGTGTGATAT-AGAAGTGGTGTGATATDesign primers
1360616CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAATDesign primers
1413104CTCAAATCATCATAATTAACC-CTCAAATCATCATAATTAACC-CTCAAATCATCATAATTAACC-CTCAAATCATCATAATTAACC-CTCAAATCATCATAATTAACC-CTCAAATCATCATAATTAACCDesign primers
1425359AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-ATDesign primers

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