Microsatellites /Tandem Repeats database

Genome: Mycoplasma hyorhinis DBS 1050

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
53716ATTTT-ATTTT-TTTTT-TTTTT-TTTTTDesign primers
68741AATCTTAAAAATTCATAAAAAATATTTAAADesign primers
80823TA-AA-AA-CA-AA-AA-TA-AA-GA-CA-AA-AADesign primers
91716AAAAATAAAAAAGAAAAATAAAGAAAATAADesign primers
103354AAAAACAGAAACAAAAATTAAAACAAAAATDesign primers
104504ACAAAAATAAAAGAAAATAAAGAAAAATTADesign primers
128983AAGCAAAAGAAAGAGCAAAAGAAADesign primers
149086TAATTTTTTAGTTTTTTAATTTGTDesign primers
168287ATTTAAAAAAATTCAAAATAATTTTAATAAATATCAAAAADesign primers
215553AATTAAATAAAATTTAATTGAGTTADesign primers
236812TTCTTCTTTTTTGTTCATTTTTCTCCTTATDesign primers
243768TT-TT-AT-TA-TA-TT-TT-TC-TT-TA-TT-TT-TDesign primers
253229AAATAAATAAGTAAATAAATAATTDesign primers
254219TCTTGCTATTGCTCTTCCTATTGCDesign primers
262287TG-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CTDesign primers
264786TT-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AADesign primers
301142AATATTATTATTATTATTAATCTTDesign primers
310798AAAAATTTACAAATTTAATAATTTDesign primers
325377TTTTTTTTCTTTCTTATTTTTTTATDesign primers
337373CTGTTTCTGTATCTGTATCTGTTGDesign primers
356323CAAC-AAAC-AAAC-AAAC-AAAC-AAACDesign primers
359890AAACAATACAAAAAATACAAAAAATACDesign primers
367147TTTTAAAATCTACTTTAAAATCTTTTTTATTATCTADesign primers
399409ATATTTTTTAATAATTGTTACTATTTTTTTDesign primers
404829AAAAAAACAAACAAAAAAAACAAAADesign primers
459627CTTTTGTAAATCTTTTAAAAATCTTTTCTCAATDesign primers
481086AAATTTAAAAAATTTAATATATTTAAADesign primers
500471TAATTTTTTAATTGTTAAATTTTTDesign primers
509772GAAAAATTTAAGAAAAAATCAAGAGAAAGTTAADesign primers
561937AAAAA-TAAAA-TAAAA-ATAAA-ACAAADesign primers
562412TAAAT-TTAAT-TGAAT-TGAAT-TGAATDesign primers
572285ATTTTAATTTAAATTTCATTTTTADesign primers
584791AA-TA-TA-TA-TA-TA-TA-TA-TA-TA-TA-TADesign primers
618839TAATA-TAATT-AAATA-AAATA-TAATADesign primers
640320AA-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-ATDesign primers
667874TATTTTCCTTTATTTTAATTAATTTTGCTTDesign primers
694821AAAAAAAGAAAAATAAAAGAAGAAAAAAGADesign primers
707796CTTCATTTTTCTTCTTTTTCCTTTAATTTTDesign primers
712907AA-AA-AA-AC-AA-AA-AA-CA-AA-AA-AA-AG-ADesign primers
713733ATAAAATTATAAAAATATAAAATCDesign primers
739852AAATCAAAATCTAACTCAAAATTADesign primers
748689AAAAAAATAAAGAAAAATTAAACAAGATAADesign primers
760863AAACAAAAACTAAAACAAAAACATDesign primers
777995ATTTTGTTTTTTTGTTAATTTGTTDesign primers
780621AAAGTGAAGTAAAGAAAATTAAAGADesign primers
784509TTTCAAAATTTCTAAATTTCATAADesign primers
813327TCAGGTTCAGGAGCAGGTTCTGGTDesign primers
815262ATTTTTTTAACTTTTTTAAATATTTTTTAADesign primers
819787AT-TT-AT-AT-AT-AT-AT-AT-AT-AT-AT-ATDesign primers
820910AAAATGAAGAAAAAAGAAGAAAAATTAATADesign primers
833257AATTAATTTAAATTGATCTACATTAATTTGDesign primers
834502AAAAAAAGAAAAAAAGAATAAAAADesign primers
834570ATAATAAATTAATAAAATTATAAADesign primers

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