Microsatellites /Tandem Repeats database

Genome: Thermotoga hypogea NBRC 106472

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
128910GACGGTGGCGATGGTGGCGACGGTGGCDesign primers
330337GTGGTAGATTGCGTGGTAAGTTGCGTGGTAAATTTCDesign primers
495299CACTTTCACCTTCAATTTCACTTGDesign primers
636025GGCTATGGCTCTTGCTATGGCTATDesign primers
673582TTCGAAGGTTCGATGGTTCGAAAGDesign primers
884189TGTGAAAACGTTTCTGAAAACGTTCTTGAAAACGTTDesign primers
1081493TATCTCACTCTTTCTCACTTTGTCTCTCTCDesign primers
1401678TATGCTCTCTTTTGCTTTCTTATGCTCACADesign primers
1648071CCGCCCACTCAGCCGCCTACACAGCCACCAACTCAGDesign primers
2000841AAGGAAAACGAAAGGGAAAAGGATDesign primers
2077462AGAAAAAGAAAGCAACAGAAAGAAATAGAGDesign primers
2122538AAGAAGATAAAAGGAGAAAACAGAAGAAAADesign primers

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