Microsatellites /Tandem Repeats database

Genome: Listeria monocytogenes strain R2-502

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
6312CTTAAATCTGCACCATTTAAATCTGCACCACTTAAATCTGCACCADesign primers
6371ACTTAAATCTGCACCATTTAAATCTGCACCATTTAAATCTGCACCDesign primers
6462CTTAAATCTGCACCT-CTTAAATCTGCACCT-CTTAAATTTGCACCTDesign primers
8107TTGTTCGGTGG-CTGTTCGGTGG-CTGTTCGGTGGDesign primers
1466334GGTGTATGGTTGGTGTATAGTTGGTGTATAGTTDesign primers
1576895ACTGGGTCTACCGGGTCT-ACTGGGTCTACCGGGTCT-ACTGGGTCTACCGGATCTDesign primers
1576950CCGGATCTA-CCGGATCTA-CCGGATCTA-CCGGATCTA-CCGGATCTA-CCGGATCTA-CCGGATCTADesign primers
1847080TGGTTTTAT-AGGTTTTAT-AGGTTTTAT-AGGTTTTAT-AGGTTTTAT-AGGTTTTATDesign primers
2057709GTGTATCTTTTG-GTGTATCTTTTG-GTGTATTTTTTG-GTGTATTTTTTG-GTGTATCTTTTG-GTGTATTTTTTGDesign primers
2509056GCATCGGCATCCGCATCAGCATCCGCATCAGCATCCDesign primers
2509593TCAGCATCGGCGTCAGCATCCGCATCGGCGTCAGCATCCGCATCGGCGTCAGCADesign primers
2509692GCATCCGCATCA-GCATCCGCATCA-GCGTCCGCATCADesign primers
2509755TCAGCGTCGGCGTCAGCATCGGCGTCAGCGTCAGCGDesign primers
2509809TCCGCATCGGCG-TCCGCATCGGCG-TCCGCATCAGCG-TCCGCATCGGCGDesign primers
2509911TCCGCATCAGCG-TCCGCATCAGCG-TCGGCATCAGCGDesign primers
2509977TCCGCATCGGCGTCAGCATCGGCGTCAGCATCGGCGDesign primers
2510049TCCGCATCGGCGTCAGCATCGGCGTCCGCATCGGCGDesign primers
2510244GCGTCAGCATCGGCGTCAGCATCAGCGTCGGCATCGDesign primers
2510334GCATCAGCGTCGGCATCCGCATCAGCGTCGGCATCAGCGTCAGCGTCGGCATCCDesign primers
2510430GCATCCGCATCAGCGTCAGCATCCGCATCCGCATCAGCGTCGGCATCCGCATCAGCGTCAGCGTCAGCATCCGCATCCGCATCAGCGTCAGCATCCDesign primers

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