Microsatellites /Tandem Repeats database

Genome: Listeria monocytogenes J1816

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
465960GTGTATCTTTTGGTGTATTTTTTGGTGTATCTTTTGDesign primers
969133TGGTGTTGGTGGCACTGGTGTTGGTGGTAC-TGGTGTTGGTGGCACTGGTGTTGGTGGTAC-TGGTGTTGGTGGCACTGGTGTTGGTGGCACDesign primers
1691217GAACAACAGACGAACAACAAACGAACAACAGATDesign primers
2226425GATGCTGACGCCGATGCTGACGCTGATGCCGACGCCDesign primers
2226629GACGCTGATGCT-GACGCTGATGCT-GATGCTGATGCTDesign primers
2226668GCTGACGCCGATGCTGATGCTGACGCCGACGCTGATGCTGACGCTGATGCTGATDesign primers
2226791GATGCCGACGCTGATGCG-GATGCCGACGCTGATGCG-GACGCCGACGCTGATGCGDesign primers
2226863GACGCTGATGCTGACGCCGATGCTGACGCTGATGCGGATGCTGATGCTDesign primers
2226977GACGCTGATGCGGACGCTGATGCTGATGCTGATGCGDesign primers
2227019GACGCTGATGCTGATGCTGATGCTGACGCCGATGCTGACGCTGATGCGDesign primers
2227079GATGCGGATGCGGACGCTGATGCGGATGCCGACGCTGATGCGGATGCCGACGCTDesign primers
2227134ATGCTG-ATGCTG-ATGCTG-ATGCTGDesign primers
2227205GATGCTGACGCTGATGCGGATGCCGACGCTGATGCGGATGCCGACGCTGATGCGDesign primers
2227337GATGCTGACGCCGATGCGGATGCCGACGCCGATGCGGATGCTGACGCCGATGCCDesign primers
2925751GGGTCTACC-GGATCTACC-GGATCTACC-GGATCTACC-GGATCTACC-GGATCTACC-GGATCTACC-GGATCTACC-GGATCTACC-GGATCTACC-GGATCTACC-GGATCTACCDesign primers

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