This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 8958 | TTTTTGTCTCTGCAGGTGG-TTTTTGTCTCTGCAGGTGG-TTTTTGTCTCTGCAGGTGG-TTTTTGTCTCTGCAGGTGG | Design primers |
| 101421 | ATAGGACAAT-ATAGGACAAT-ATAGGACAAT | Design primers |
| 103845 | TAGGGAAAA-TAGGGAAAA-TAGGGAAAA | Design primers |
| 155930 | GGCGAAACT-GGCGAAACT-GGCGAAACT-GGCGAAACT-GGCGAAACT-GGCGAAACT-GGCGAAACT-GGCGAAACT-GGCGAAACT-GGCGAAACT-GGCGAAACT-GGCGAAACT-GGCGAAACT | Design primers |
| 257168 | GCTGTCG-GCTGTCG-GCTGTCG-GCTGTCG | Design primers |
| 410353 | GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT | Design primers |
| 514652 | GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT | Design primers |
| 613766 | ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC | Design primers |
| 613954 | CAGCA-CAGCA-CAGCA-CAGCA-CAGCA-CAGCA-CAGCA-CAGCA-CAGCA-CAGCA-CAGCA-CAGCA | Design primers |
| 928556 | TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC-TCCAGC | Design primers |
| 928648 | CCAGCT-CCAGCT-CCAGCT-CCAGCT-CCAGCT-CCAGCT-CCAGCT-CCAGCT-CCAGCT-CCAGCT | Design primers |
| 1390302 | TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA | Design primers |
| 1425934 | ACAAAAAACA-ACAAAAAACA-ACAAAAAACA | Design primers |
| 1520024 | AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA | Design primers |
| 1591887 | CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC | Design primers |
| 1720978 | GTAGTAGTAA-GTAGTAGTAA-GTAGTAGTAA-GTAGTAGTAA | Design primers |
| 1721019 | TAGTAGTTGG-TAGTAGTTGG-TAGTAGTTGG-TAGTAGTTGG | Design primers |
| 1723064 | TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC | Design primers |
| 1814040 | CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT | Design primers |
| 1878846 | AAAAAAACTGAAGAGGAT-AAAAAAACTGAAGAGGAT-AAAAAAACTGAAGAGGAT-AAAAAAACTGAAGAGGAT | Design primers |
| 2154754 | AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA | Design primers |
| 2229619 | TTCACTA-TTCACTA-TTCACTA-TTCACTA-TTCACTA-TTCACTA-TTCACTA-TTCACTA | Design primers |
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