Microsatellites /Tandem Repeats database

Genome: Staphylococcus aureus CA-347

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
134660TTGTTGCCGTCTTCTTTACCAGGTTTGTTGTTGTCTTCTTTACCAGGTTTGTTGTTGTCTTCTTTACCAGGTTTGTTGCCGTCTTCTTTGCCAGGTDesign primers
454941TCCAAACCC-TCCAAACCC-TCCAAACCCDesign primers
618176AGCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGATDesign primers
622486AGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGATDesign primers
622594AGCGACTCAGATTCAGAT-AGCGACTCAGATTCAGAT-AGCGACTCAGACTCAGAT-AGCGATTCAGATTCAGAT-AGCGACTCAGATTCAGAC-AGCGACTCAGACTCAGAT-AGCGATTCAGATTCAGATDesign primers
622738AGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGATDesign primers
622996TCAGACTCAGACAGTGATTCAGACTCAGATAGTGATTCAGACTCAGATAGTGATDesign primers
626756TCAGATTCAGACAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGTGACDesign primers
861802AGTGATTCAGATTCAGCGAGTGATTCAGATTCAACGAGTGATTCAGATTCAGCGAGTGATTCAGATTCAGCADesign primers
1861338CATTCATAT-CATTCATAT-CATTCATATDesign primers
2005864ATTTGTTGTTG-ATTTGTTGTTG-ATTTGTTGTCGDesign primers
2112326TGTTGGTTTGATGTTGTTTTGATGTTGGGTTGADesign primers
2112367TGATGTTGTTTTGATGTTGGTTTGATGTCGTTTTGATGTTGGTTDesign primers
2274602TCCAGCTGGTTGTGTTGTTCCTGCTGCTGGTTGTGTTGTTCCTGCTGCTGGTTGTGTTGTTCCDesign primers
2336261AGGGGTAACTAAAGGGTAACTAAAGGGTAACTADesign primers
2752588TCTGAATCGCTGTCTGAATCCGAATCGCTGTCTGAATCTGACTCGCTGTCTGAADesign primers
2752816TCTGAATCCGAATCGCTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTGDesign primers
2753086TCTGGGTCTGGGCTTGGTTCTGGGTCTGGACTTGGTTCTGGGTCTGGGCTTGGCDesign primers
2764986AATCAATCAAATTCA-AATCAATCAAATTCA-AATCAATCAAGTTCADesign primers

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