Microsatellites /Tandem Repeats database

Genome: Streptococcus agalactiae 09mas018883

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
37488AGTTGAAATTGAAGTAGATGTTGADesign primers
49604AAAAATCAAAATCAAAATAAAAAADesign primers
115407ACG-AAG-AAG-ACG-ATG-AAG-AGG-AAG-AAG-AGG-AAG-AAGDesign primers
365181ATTACAGCTGGTATTGCAGCCGGTATTGCAGCCGGTDesign primers
627811TTGGT-ATGGT-TTGGT-TTGAT-TTGGTDesign primers
628520CTTTCGAACTAATTTCGAACTGTTTTCGAACCADesign primers
701175TCGTAAAGCTGAAGAAGC-ACATAAAGCTGACGAAGC-ACGTAAAGCTGAAGAAGC-ACGTAAAGCTGAAGAAGC-ACATAAAGCTGAAGAAGT-ACGTAAAGCTGAAGAAGCDesign primers
789537TAAGGAAATAAAGAAATAAGCAAADesign primers
1055379AAAAATTCAAAAACTCAATAATTCDesign primers
1063835ATTGGTATTGCTTTTGGTCTTGGTDesign primers
1264194ACA-ATA-ATA-ATA-ACA-ATA-AAA-ATADesign primers
1481136TTTTTTTATTTTTCTTATTTTTTTTDesign primers
1505952TGTGGAAGCACTGGTTGAAGCACTGGTTGAAGCACTDesign primers
1671499ATCTTCTTCATTTTCTTCAGCTTCTTCDesign primers
1879165AATCCAAAATAATCTAAAAAAATCAAAACTDesign primers
1918529ATACAAAACAAAATAAAACATTACAAGACADesign primers
1918560TTTTTATTTATTTTTGTTTATTATTGTTTADesign primers
1972790AAAATATAAAAGTATAAAAATCTADesign primers
2005930GCTTCTGGTTTAGCCTCTGGCTTAACGTCTGGTTTAACTTCTGGCTTADesign primers
2005991CCTCTGGCTTAACGTCTGGTTTAACTTCTGGCTTAGCCTCTGGTTTAACTTCTGGCTTAGDesign primers
2006052CTCTGGTTTGGCTTCTGGTTTGGCCTCTGGTTTGGCTTCTGGTTTGGCCTCTGGTTTGGCDesign primers
2006113TCTGGCTTAGCTTCTGGCTTAACGTCTGGCTTAACATCTGGTTTGGCTTCTGGTTTAACTTCTGGCTTAGCTTCTGGTTTGGCTDesign primers
2070846TCAAAAATAATCAAAATTCATCAAAAATCTTCAAAAAAACDesign primers
2133003TTTGTCAATGTTTGTCACTCTTTGTAAACGDesign primers

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