Microsatellites /Tandem Repeats database

Genome: Desulfotomaculum gibsoniae DSM 7213

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
25852CCACCTGTCCCATACCTGTCCCACACCTGTCCCDesign primers
164607AGAGAAGAAGGCAGAAAAGAAGGTAGAACAGAAGGCDesign primers
287289GCGGTG-GCGGTG-GCGGCG-GTGGTG-GCGGTGDesign primers
525167TAAATTACAGTGAATTACAGCGAATTACAGDesign primers
652433TGTTGAA-AGTTGAA-AGTTGAA-AGTTGAADesign primers
675164TGTTGAAA-GGTTGAAA-GGTTGAAADesign primers
751132CTAAACCAATTAAACCAACTAAACCAADesign primers
860820ATAATC-ATTATC-ATTATC-ATTATCDesign primers
882663CTTTGTCATCCTTGTCATCCTTGTCATDesign primers
983801CAGCTGAACCAACTGAACCAGCTGAACCAACTGAACDesign primers
1001705TTTAACGGCAA-AATAACGGCAA-TTTAACGGCAA-TTTAACGGCAADesign primers
1014343TTTTTTTTCTTTTTCTTTTGTTTTTDesign primers
1068317TTGCAAGGTTAATGCAAGGTTCCGGCAAGGTTAATGCAAGGTTGDesign primers
1129681GAAGTT-GAAGTT-GAAGCT-GAAGCTDesign primers
1190912TGTAACAACTTTGTAATAATTTTTTAACAACTTDesign primers
1202413TGTTGAAA-GGTTGAAA-GGTTGAAADesign primers
1234491CGGAATGGGCGGCATGGGCGGAATGGGDesign primers
1380964TT-TT-TT-TA-TA-TT-TT-TT-TG-AT-TT-TT-TG-TT-TG-TA-TDesign primers
1469218GCATGGTTGGGCATGGCTGGGCATGTTGGGDesign primers
1497833AAAAAATAAAAAAAGAAAACAAAGADesign primers
1557225GAAGGGGT-AAAGGGGT-AAAGGGGT-AAAGGGGTDesign primers
1564507AAAATAAG-GAAATAAG-GAAATAAGDesign primers
1636060TAATTATAGCG-TAATTATAGCG-CAAATATAGCGDesign primers
1678811TATTCAGGCAGATAGTCAGGCAAAAAGTCAGGCAGADesign primers
1684451CCGCGGTGCGCCCGCGGTGGACCCATGGTGCGCDesign primers
1732228AATAAAGCATAGTATAGCATAATAAACCCTDesign primers
1781775GTCAGTATTCAGTAGACAGTAGTCAGTADesign primers
1842566GATGAACCT-GATAAACCT-GATAAACCA-GATGAACCT-GATAAACCT-GATAAACCT-GATAAACCT-GATAAACCT-GATAAACCT-GATAAACCTDesign primers
2126774AAAAAAGAAAAAGAATAAAAAAAATDesign primers
2151754TGACGTTGAAGTTGACCTTGTCGTDesign primers
2176999AA-TA-TA-AA-TA-TC-TA-TA-TA-AT-TA-TA-TA-TA-TADesign primers
2202843ACCTCAATTTACCTTATTTTACCTCAATGGDesign primers
2217365AACAATG-TACAATG-TACAATG-TACAATGDesign primers
2282435ATATTAATATCAATAATAATTTTADesign primers
2286926TTACCTTCAGCC-CTACCTTCAGCC-CTACCTTTAGCCDesign primers
2295070CTTTACCTTCAGCCCTACCTTCAGCCCTACCTTCAGDesign primers
2430355TATTTGTATTTTCATTTGTAGTTGDesign primers
2450839TTGACTGATGGACTGATTGCCTGADesign primers
2467221TCAACT-TCATCT-TCATCT-TCATCTDesign primers
2620639AATGCTTATATGCTAACTGCTTCTATGTTAAATGCTTGTATGATADesign primers
2651728CCA-CCA-GCA-CCA-GCA-CCA-CCA-GCADesign primers
2684876AAAGGTCGTGCT-GAAGGTCGTGCT-GAAGGCCGTGCT-GAAGGCCGTGCT-GAAGGCCGTGCTDesign primers
2688800ATTAAT-ATTAAT-ATTCAT-ATTCATDesign primers
2697648TAAATGCCTAATATATGCTTAATATATACCTAADesign primers
2733795TATTTTTGGATTTTTGTATTTGTGDesign primers
2795344TAAACTTGCTTAAACTTTCTTAAACTAACTDesign primers
2910166TAAACTAAAATAAAATTAACTTAACDesign primers
2966330TT-TT-TT-GT-TT-AT-TT-TT-TT-AT-GT-TT-TDesign primers
3046121CTGTTTCTGGTTCTGATTCTGCTTDesign primers
3115070TTTTCAAC-CTTTCAAC-CTTTCAAC-CTTTCAACDesign primers
3276832AGACTATAATGC-TAACTATAATGC-TAACTATAATGCDesign primers
3285337TTCAATTTCATTATCAATTTCAAADesign primers
3465760AATAT-AATAT-TATAT-AATTT-TATATDesign primers
3628010TACATCAACATCTATATCTACATTDesign primers
3690871TTAAT-TCAAT-TCAAT-TTAAT-TTAAT-TTAATDesign primers
3789227AAACT-GAACT-AAACT-CAACT-CAACTDesign primers
3882904TACTTCTTCTTCGACTTCTTCTTCDesign primers
3920077TCAATTTTGCCTTCAAGCTTGCCTTCGAGTTTGCCTDesign primers
4022468TTCAACTATCAACTTTCAGCTTTCAACADesign primers
4035639ACGTTCA-ACGTTTA-ACTTTCA-ACTTTCA-ACTTTCADesign primers
4139660TTCGAACTTCTAACTTCGAACCTCGAACDesign primers
4167833GAAATATATGGACATGTATGGTAATATATTDesign primers
4229093GGCCTCCGCCTCGGCCCCGGCATCDesign primers
4310627TTATGATTCATCTTGATTCATCCTGATTCADesign primers
4334890CCGGGCCAGGGCACGGGCCGGGGCDesign primers
4355092ATATTATATTATATTTTTTTATATTAAATADesign primers
4424657AACTTTCAACCTTTCAACCTTTCADesign primers
4427850ATTTAACCTTTCAACCTTTAGCATTTCAACCTTTAGCATTTCAACDesign primers
4427959AACTTTCAACCTTTCAACCTTTCADesign primers
4445805AACTTTCAACCTTTCAACCTTTCADesign primers
4485670AAAAGTGGACTAAAATGGACTAAAGTGGACDesign primers
4508960CGG-TGG-AGG-TGG-CGG-CGG-CGG-TGGDesign primers
4528621GGTAAACTTGAGGGCAAGCTTGAGGGCAAGCTTGAGGGTAAACTTGAADesign primers
4601531GATTCTACTGGATTTTACTCCATTTTACTGDesign primers
4677778GTCGGGGACATTCTTCAATTGGAGACATTCTTCAGTTGGGGACATTATCCADesign primers
4737473GCAGCAAGACAGGGGCAAGACAGGGGCAAGACADesign primers
4801997TCTGTTCCATATGTTCCATATGTTCCADesign primers

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