Microsatellites /Tandem Repeats database

Genome: Listeria monocytogenes N53-1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
146194TAGTACCACCAACAC-CAGTACCACCAACAC-CAGTACCACCAACAC-CAGTACCACCAACACDesign primers
1070651TCCAGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCAGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGADesign primers
1212199TCCAGACCCAAC-ACCAGACCCAAC-ACCAGACCCAACDesign primers
1751620GCATCAGCGTCA-GCATCAGCGTCA-GCATCGGCGTCADesign primers
1752331TCGGCA-TCCGCA-TCAGCA-TCCGCA-TCCGCA-TCCGCADesign primers
1752394GCATCAGCGTCAGCATCCGCGTCAGCATCCGCGTCADesign primers
1752433TCGGCATCCGCATCCGCATCAGCATCGGCATCCGCATCGGCATCAGCGTCGGCATCCGCATCGGCGTCAGCADesign primers
1752689TCGGCATCCGCATCTGCATCCGCATCGGCATCAGCADesign primers
1752726CCGCGTCAGCATCAGCGTCAGCATCAGCGTCAGCATDesign primers
1753002GCATCA-GCATCA-GCATCA-GCATCADesign primers
1753062GCATCGGCGTCAGCATCCGCGTCAGCATCAGCGTCAGCATCCGCGTCADesign primers
1753140GCATCCGCGTCGGCATCCGCATCGGCATCCGCGTCADesign primers
1753191TCGGCATCGGCGTCAGCATCCGCATCGGCGTCAGCATCCGCATCGGCGTCAGCADesign primers

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