Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Halovivax ruber XH-70

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | **0.1** | 0.2
Position	Sequence
78999	TC-TC-TC-AC-TC-TC-TC-TC-TC-TC-TC-AC-TC-TC-TC-TC-AC-TC-TC-TC-TC-TC-TC-AC-TC-TC-TC-AC-TC-TC-TC-AC-TC-TC-TC-TC	Design primers
452990	AC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC	Design primers
488088	GT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT	Design primers
521619	GT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT	Design primers
550791	CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT	Design primers
702766	AT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT	Design primers
785257	CCCCGGGGACGGACGACC-ACCCGGGGACGGACGACC-ACCCGGGGACGGACGACC	Design primers
1154031	GG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG	Design primers
1207549	GG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG	Design primers
1227695	GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT	Design primers
1238182	TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC	Design primers
1295183	TT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT	Design primers
1327894	TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC	Design primers
1361802	GT-AT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT	Design primers
1650321	GATCAGCCCGATCTGCTACTCGGATCAGTCCGATCTGCTACTCGGATCAGTCCGAGCTGCTACTCG	Design primers
1686865	TC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC	Design primers
1868283	CCA-CCA-CCA-CCA-CCA-CCA-CCA-CCA-CCA	Design primers
1893957	AA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA	Design primers
2076033	CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA	Design primers
2203479	CGGACTCGT-CGGACTCGT-CGGACTCGT-CGGACTCGT	Design primers
2344046	AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG	Design primers
2424750	CG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG	Design primers
2429385	TA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA	Design primers
2727047	AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC	Design primers
2738217	AA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA	Design primers
2756829	AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG	Design primers
2795758	AT-CG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG	Design primers
2798546	CG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG	Design primers
2890898	GA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA	Design primers
2963254	CG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG	Design primers
3122648	GA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA	Design primers
3198314	AG-CA-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

78999

TC-TC-TC-AC-TC-TC-TC-TC-TC-TC-TC-AC-TC-TC-TC-TC-AC-TC-TC-TC-TC-TC-TC-AC-TC-TC-TC-AC-TC-TC-TC-AC-TC-TC-TC-TC