Microsatellites /Tandem Repeats database

Genome: Halovivax ruber XH-70

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
79038CTCTCTCA-CTCTCTCA-CTCTCTCADesign primers
452991CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CTDesign primers
488089TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TCDesign primers
521620TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TCDesign primers
550791CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CTDesign primers
702767TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TCDesign primers
785258CCCGGGGACGGACGACCA-CCCGGGGACGGACGACCA-CCCGGGGACGGACGACCADesign primers
1154032GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GTDesign primers
1207550GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GTDesign primers
1227695GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GT-GTDesign primers
1238182TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TCDesign primers
1295184TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TCDesign primers
1327894TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TCDesign primers
1361805TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TG-TGDesign primers
1686866CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CADesign primers
1868283CCA-CCA-CCA-CCA-CCA-CCA-CCA-CCA-CCADesign primers
1893958AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-ACDesign primers
2076033CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CADesign primers
2203479CGGACTCGT-CGGACTCGT-CGGACTCGT-CGGACTCGTDesign primers
2344046AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AGDesign primers
2424751GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GADesign primers
2429386AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AGDesign primers
2727047AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-ACDesign primers
2738218AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-ACDesign primers
2756829AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AGDesign primers
2795761GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GADesign primers
2798547GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GADesign primers
2890899AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-ACDesign primers
2963255GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GADesign primers
3122649AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-ACDesign primers
3198318AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AGDesign primers

Please help us improve this resource by reporting problems, suggestions etc.