Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Cyanobacterium aponinum PCC 10605

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
6018	ATTACTCGTTACTCGTTACTCATTACTT	Design primers
7485	GCTGTTTCTGTTGATGTTGCTGTT	Design primers
17616	CCAATTA-CTAATTA-CTAATTA-CTAATTA	Design primers
24411	CTATTGC-CTATTGC-CTCTTGC-CTCTTGC-CTCTTGC	Design primers
24743	GCCTCTT-GCCTCTT-GCCTTTT-GCCTTTT-GCCTTTT	Design primers
29436	AGTAATGAGTAACGAGTAACGAGTAATT	Design primers
29653	CCACCTG-CCACCTG-CAACCTG-ACACCTG	Design primers
30805	TATTCAC-TATACAC-TATACAC-TATACAC	Design primers
33131	TTACTCGTTACTGGTTACTCATTACTCC	Design primers
33164	ACCTGACACCTGCCACCTGATACCTGCC	Design primers
33229	ACACCTGCCACCTGATACCTGACACCTC	Design primers
57187	CAATTAGTAATTAGTAATTAGCAATTAA	Design primers
57290	TTAATTCACTATTCATTATTCACTATTCATTATTCACTATTC	Design primers
62462	TTGAGTA-ATGAGTA-ATGAGTA-ATGAGTA	Design primers
68597	ATTGCCT-ATTGCCT-CTTGCCT-GTTGCCT	Design primers
70413	AAATAAAATGAATTAAAATTATATA	Design primers
81028	CAGGTTTCAGGTGTCAGGTGTCAAGTTT	Design primers
81088	CCTATTG-CCTATTG-CCTATTG-CCTATTG	Design primers
83010	GGGTATTAGGGTATTGGGGTGTTA	Design primers
112261	TTTTTAA-TTCTTAA-TTCTTAA-TTCTTAA-TTTTTAA	Design primers
112297	TATCAAC-TATTAAC-TATTAAC-TATTAAC-TATTAAC	Design primers
133324	GCCTCTT-GCCTCTT-GCCTTTT-GCCTTTT	Design primers
134316	TTACTCGTTACTGGTTACTCATTACTCC	Design primers
134349	ACCTGACACCTGCCACCTGATACCTGCC	Design primers
134382	TCCCCCCATCCCCTCATCTCCCCA	Design primers
135458	AAGGCAA-GAGGCAA-GAGGCAA-AAGGCAA	Design primers
135509	GTAAATA-GTGAATA-GTGAATA-GTGAATA-GTGAATA	Design primers
141866	TCAGGTT-TCAGGTT-GCAGGTT-ACAGGTT	Design primers
141909	AAGTAATAAGTAACGAGTAATAAGTAATAAATAAT	Design primers
142021	TTTGCCT-CTTGCCT-CTTGCCT-TTTGCCT	Design primers
144718	GGAGTAA-TGAGTAA-CGAGTAA-CGAGTAA	Design primers
153700	TTTTTAA-TTCTTAA-TTCTTAA-TTCTTAA	Design primers
160863	GGATGAGG-AGATGAGG-AGATGAGG	Design primers
160905	TCAGGTT-TCAGGTT-TTAGGTT-TCAGGTT	Design primers
160960	TTTTTAA-TTCTTAA-TTCTTAA-TTCTTAA-TTCTTAA	Design primers
180936	CCACCTG-CAACCTG-CAACCTG-CAACCTG	Design primers
183169	AAACCTG-AAACCTG-ACACCTG-AAACCTG-AAACCTA	Design primers
208356	GATGGGGTGATAGGGTGATGAGGT	Design primers
216142	ACCTGACACCTGCCACCTGATACCTGCC	Design primers
224024	GCAAGGGGCAAAGGGAAAGGGGCAAAGGGCAAAGG	Design primers
224066	TTAATAA-TTAAAAA-TTAAAAA-TTAAGAA-TTAAGAA-TTAAGAA-TTAAAAA	Design primers
224184	TCTCCCTCTCCCCTCA-TCTCCCCATCCCCCCA-TCTCCCCATCCCCCCA-TCTCCCCATCCCCCCA	Design primers
273786	CAATACCCCAATCCCCCAATAACC	Design primers
276255	GGAAAGGGAAGGAGAGGCAAGAAAA	Design primers
288773	AAAAATT-AAGAATT-AAGAATT-AAAAATT	Design primers
317711	AGGGGATG-AGGGGATG-AGGTGATG	Design primers
321248	GATGGGGG-GATGGGGG-GATGAGGG	Design primers
327484	TCATGACCATGAACATGATCATCA	Design primers
334279	ATTAGTT-AATAGTT-AATAGTT-AATAGTT-AATAGTT	Design primers
334335	CTCCCCTC-ATCCCCTC-ATCCCCTC	Design primers
346580	GAACTCCGAACCCCGAACCCCGAACTCT	Design primers
359299	AAAAGGC-AAAAGGC-AAGAGGC-AAGAGGC	Design primers
373967	AAAAGGC-AAAGGGC-AAGAGGC-AAGAGGC-AAGAGGC	Design primers
382914	TAGGCAA-GAGGCAA-GAGGCAA-TAGGCAA	Design primers
386456	AAACCTGCAACCTGAAACCTGAAACCTAAAACCTA	Design primers
408140	CTAAAAC-CTGAAAC-CTGAAAC-CTGAAAC	Design primers
409141	AAAATTAACATAAATTAGCATAAATTAACA	Design primers
415017	ATTATTC-ACTATTC-ACTATTC-ATTATTC	Design primers
423133	TTTTTAATTCTTAATTTTTAATTCTTAA	Design primers
428720	ACACTAT-TCACTAT-TCACTAT-TCACTAT	Design primers
441502	CAATAAT-TAAGAAT-TAAGAAT-TAAGAAT-TAAAAAT-TAAGAAT	Design primers
441622	TCCCCTCATCACCTCATCCCCCCATCTCCTCA	Design primers
444873	ATTACTCGTTACTCGTTACTCATTACTT	Design primers
444934	CCATCCCCTCATCCCCCTATCCCC	Design primers
455057	TTGGGGTGTTGGGGTATTGGGGAG	Design primers
455127	TTCATTCTTCATTTTTAATTCTTCATTC	Design primers
459307	ACCCTGA-AACCTGA-AACCTGA-AACCTGA	Design primers
465175	AAAATAAAAATTAAGATAAAATTA	Design primers
474406	GCTAGAAGCCTGTCC-TACAGAAGCCTGTCC-TACAGAAGCCTGTCC-TACAGAAGCCTGTCC-TACAGAAGCCTGTCC	Design primers
475585	AGGTTTCAGGCTTCGGGTTTCAGGTGTCAGGTTTA	Design primers
475775	TTAATTTTTAGTTTTTAATTCTTAATTC	Design primers
482836	ACCTGACACCTGCCACCTGATACCTAAC	Design primers
488206	TAAAACC-TGAAACC-TGAAACC-TAAAACC	Design primers
495472	AGAATTA-AGAATTA-AAAATTA-AAAATTA	Design primers
497088	TTAAGAATTAAGGATTAAGAATTAAAAA	Design primers
498553	TTTGCCT-CTTGCCT-CTTGCCT-CTTGCCT	Design primers
508302	ATTATTC-ACTATTC-ACTATTC-ACTATTC	Design primers
511650	AGGTATT-AGGTATT-AGGTGTT-AGGTGTT	Design primers
515177	AGGTTTC-AGGTTTC-AGGTTGC-AGGTTGC-AGGTTGC-AGGTGTC	Design primers
527863	TAATTCCTAATTACTAATCCCTAATTCC	Design primers
528500	AAAAATTAAGAATTAAGAATTAAAAACT	Design primers
532861	TTTTTTATTTATTTTATTGTTTTTATT	Design primers
534857	TTC-ATC-ATC-ATC-ATC-ATC-ATC-ATC	Design primers
568306	ATGAATA-GTGAATA-ATTAATA-ATTAATA-ATTAATA	Design primers
568350	ACTCATT-ACTCATT-ACTCGTT-ACTTATT	Design primers
571018	TGAGTAA-TAAGTAA-TAAGTAA-TAAGTAA	Design primers
578506	AAAACCT-GAAACCT-GAAACCT-GAAACCT	Design primers
584178	ACTTAGACTTACTCTTAGAGTTAG	Design primers
593235	AAAGGGC-AAAGGGC-AAGGGGC-AAAGGGC	Design primers
596064	ATAATTAAAAATTAAGAATTAAGAATTA	Design primers
601603	TTTTTAA-TTCTTAA-TTCTTAA-TTTTTAA-TTCTTAA-TTCTTAA	Design primers
605297	CTAAAAC-CTGAAAC-CTGAAAC-CTGAAAC	Design primers
608435	TTTTTAATTCTTAATTTTTAATTTTTAA	Design primers
615280	ATTAATT-ACTAATT-ACTAATT-TTTAATT	Design primers
635817	AGTTCGGAGTTTGGAGTTCGGAGTTCGG	Design primers
645743	TTTGCCT-CTTGCCT-TTTGCCT-TTTGCCT	Design primers
658529	TTATTAATTTTTAATTCTTAATTATCAA	Design primers
659716	AATTCTT-AATTTTT-AATTTTT-AATTCTT	Design primers
691106	ACCATTC-ACTATTC-ACTATTC-ACTATTC	Design primers
693169	AGTAATGAGTAACGAGTAACGAGTAACGAGTAATT	Design primers
693207	AACTATT-CACTATT-CACTATT-CACTATT-CACTATT	Design primers
709772	CCACCTGCAACCTGCAACCTGCAACCTGACACCTG	Design primers
739400	AAGGTTGGTATGGTTGGTATGGTTGGT	Design primers
750536	CCCTCATCACCTCATCCCCTCATC	Design primers
750562	CCTAGCA-CCTGCAA-CCTGCAA-CCTGCAA-CCTGCAA-CCTGCAA-CCTGCAA-CCTGAAA-CCTGCAA	Design primers
754406	TCCCCTCATCACCTCATCCCCCCATCCCCTAA	Design primers
765570	TAGGCAA-GAGGCAA-GAGGCAA-GAGGCAA	Design primers
778269	TTTTTAATTCTTAATTTTTAATTCTTAATTGTTAA	Design primers
780059	ATTTACAATCAATTTAAACTCAATTTAAAATCA	Design primers
782007	AATAATT-AAGAATT-AAGAATT-AAGAATT	Design primers
782066	AAACCTG-CAACCTG-AAACCTG-ACACCTG-ACACCTG-ACACCTG	Design primers
783809	ATTAACTATTCACTATTCACTATTCACTATTAGCT	Design primers
794767	GCAATTAGTAATTAGGAATTAGTAATTA	Design primers
797151	TTTTTAA-TTCTTAA-TTCTTAA-TTCTTAA	Design primers
804177	ATTTTGCCAACTTTGCCAACTTTGCCA	Design primers
818734	CTAACTCCTAACCCCGAACTCCGAACTC	Design primers
821720	CCTATTGCCTATTGCTTCTTGCCTATTGCCTCTTGCCTCTTG	Design primers
821945	TATTGCC-TCTTGCC-TCTTGCC-TCTTGCC	Design primers
846769	AACTCCG-AACTCCG-AACCCCG-AACCCCG	Design primers
848425	ACACCTG-ACACCTG-AAACCTG-AAACCTG-AAACCTG-ACACCTA	Design primers
854048	AGGTTTC-AGGTTTC-AGGTTGC-AGGTATC	Design primers
854161	CCTTTGCCTTTTGCCCCTTGCCCTTTTC	Design primers
856661	GG-AG-AG-AG-GG-GG-AG-AG-GG-GG-AG-AG	Design primers
857755	TTTTTAA-TTTTTAA-TTCTTAA-TTCTTAA-TTCTTAA-TTCTTAA	Design primers
859871	CAGGTTTCAGGTTGCAGGTGTCAGGTTT	Design primers
859906	TAATGAGTAATGAATAACGAGTAATGAG	Design primers
863529	CCTATTG-CCTATTG-CCTCTTG-CCTCTTG	Design primers
875123	CAGGTAGCAGGCAGCAGGTAGCAGGTAA	Design primers
879316	GGAGAAGGTGAAGAAGAAGGAAAA	Design primers
900947	AGGTTTCAGGTTGCAGGTTGCAGGTGTC	Design primers
901049	AACTATTCACTATTCATTATTCACTATTAACTATTCACTAAT	Design primers
901180	CAGTTAT-CAGGTAT-CAGGTAT-CAGGTAT	Design primers
911146	CCACCTGCAACCTGACACCTGACACCTG	Design primers
914167	CCACCTG-CAACCTG-CAACCTG-ACACCTG	Design primers
915547	TTTAATTTTAAATTCTTAATTTTTAATT	Design primers
928169	CCTGAAA-CCTGCAA-CCTGATA-CCTGATA-CCTGACA	Design primers
947298	CAAAGGGCAAGGGGTAAAGGGCAAAGAGCAAAGGT	Design primers
947342	ATAATTA-AGAATTA-AGAATTA-AGAATTA	Design primers
947382	GGAGGCA-AGAGGCA-AGAGGCA-AGAGGCA	Design primers
948306	GTTAGGT-GTCAGGT-GTCAGGT-GTCAGGT	Design primers
948335	GCAGGTT-GCAGGTT-GCAGGTT-TCAGGTT	Design primers
950358	AACTATT-CACTATT-CACTATT-CACTATT	Design primers
955282	TTATTTA-TTATTCA-TTATTCA-TTATTAA	Design primers
956128	AATAATTGATAATTAAAAATTAAGAATT	Design primers
963554	GCAACCTGAAACCTGCAACCTGAAACCTGAAACCT	Design primers
968372	TATCAAC-TATTCAC-TATTCAC-TATTCAC-TATTCAT-TATTCAT-TATTCAT-TATTCAC-TATTCAC	Design primers
970578	AACACCCCAACACCTCAACACCCT	Design primers
981290	TCCCCTCATCACCTCATCCCCTTA	Design primers
989073	TAGGCAA-GAGGCAA-TAGGCAA-TAGGCAA	Design primers
990635	AGGGGAG-TAATGAG-TAACGAG-TAACGAG-TAATGAG-TAACGAG-TAATGAG-TAATGAG-TAACGAG	Design primers
990720	ATTATTC-ACTATTC-ACTATTC-ACTATTC	Design primers
991487	CCTATTG-CCTATTG-CCTCTTG-CCTCTTG-CCTCTTG	Design primers
1000685	AAGAATGAAGAATTGAGAATGAAGAATA	Design primers
1000773	TTTTACTTATTACTTTTTACTTATTACT	Design primers
1001821	TTACCA-TTACCA-TTAACA-CTACCA	Design primers
1005638	AGGTATCAGGTGTCAGGTATCAGGTGTC	Design primers
1019784	TAAATTCTAAACTCTAAATTGTAAATTC	Design primers
1032208	TCAGGTTGCAGGTTTCAGGTGTCAGGTA	Design primers
1042132	ATAATTAAGAATTAAAAATTAAGAATTAAAAATTA	Design primers
1044766	AAAAATTAAGAATTAAGAATTAAGAATTAAGAATTAAAAACT	Design primers
1044832	AAACCTGTAACCTGAAACCCGAAACCTG	Design primers
1044867	ATCCCCTC-ATCCCCTC-ATCTCCTC	Design primers
1046523	AAAAATTAAGAATTAAGAATTAAAAACT	Design primers
1046582	TCCCCTCATCCCCTTATCCCCTCA	Design primers
1060007	AAAATTA-AGAATTA-AGAATTA-AGAATTA	Design primers
1068457	GGGGATGAGGTGATGAGGTGATGA	Design primers
1074358	AAAAATTAAGAATTAAGAATTAAAAACT	Design primers
1076619	TGGTGGTGATGGTGGGGGTGGTGG	Design primers
1077743	AAAAATTAAGAATTAAGAATTAAAAACT	Design primers
1079400	CCCTAATACCCCAATACCCTAATT	Design primers
1092355	AAAAATTAAGAATTAAGAATTAAGAATTAAGAATTAAAAACT	Design primers
1095578	TAGGCAA-GAGGCAA-GAGGCAA-GAGGCAA-AAGGCAA	Design primers
1100311	TTTGCCT-CTTGCCT-CTTGCCT-TTTGCCT	Design primers
1103373	CCACCTG-CAACCTG-CAACCTG-ACACCTG	Design primers
1105915	AAAGGCA-AGAGGCA-AGAGGCA-ATAGGCA	Design primers
1107585	CCCCCTAACACCCTAATCCCCTAA	Design primers
1118271	GGAGTAA-TGAGTAA-CGAGTAA-CGAGTAA	Design primers
1124213	TCTCTTG-CCTCTTG-CCTCTTG-CCTCTTG	Design primers
1132058	AAACCTGAAACCTAACACCTGAAACCTT	Design primers
1134821	AATTGTCAACTGTCAATTGTCAATTGTC	Design primers
1137725	CCTTTGC-CCCTTGC-CCCTTGC-CCTTTGC	Design primers
1147607	TC-TC-CC-TC-TC-AC-CC-TC-TC-AC-CC-TC	Design primers
1158300	ACTCATT-ACTCATT-ACTCGTT-ACTTATT	Design primers
1158382	TCCCCTCA-TCCCCTCA-TCCCCTAA	Design primers
1162121	AAAAGGC-AAGAGGC-AAGAGGC-AAGAGGC	Design primers
1170746	AATTCTT-AATTCTT-AATTCTT-AATTCTT-AATTTTT	Design primers
1175832	AAAGGGC-AAAGGGC-AAGGGGC-AAAGGGC	Design primers
1176907	TGTTATTTATTATTGGTTATTTATTATT	Design primers
1186294	AAACCTGCAACCTGAAACCTGAAACCTAAAACCTA	Design primers
1205785	AAGAATAATAATAAGAGTAAAAAT	Design primers
1213790	TGAATAGTAAATAGTGAATAGTGAATAGTGAATAA	Design primers
1217569	AGGGGATGGGGGGATGAGGTGATG	Design primers
1231650	CACTGTTCTCTGTTCCCTGTTCTCTGTTCTCTGTT	Design primers
1239800	AACTATT-CACTATT-CACTATT-CACTATT	Design primers
1248972	CGGTTATGGTGGTGGCGGTGCTGGTGGTGGCGGTGGTGGTAGTGG	Design primers
1249045	GGT-GGT-GAT-GGT-GGT-GAT-GGT-GGT	Design primers
1249152	TGG-TGG-TGC-TGG-TGG-TGC-TGG-TGG	Design primers
1255673	CTTTTCCCTGTTCCCTCTTCCCTTTTTC	Design primers
1260869	CTAATTACTAATCACTAATTGCTAATTG	Design primers
1264255	TCATTACTCATTATTCGTTACTTATTAC	Design primers
1265644	TAAATAG-TGAATAG-TGAATAG-TGAATAG	Design primers
1265683	CAATTAA-GAATTAA-GAATTAA-GAATTAA	Design primers
1266489	ACACCTGAAACCTGAAACCTGACACCTC	Design primers
1280652	ATTATTAATTATTCACTATTAACTATTA	Design primers
1285922	TTCTTTATCTTTTTCTTCTTTTTT	Design primers
1294669	TTCTCTTAATTATTTCTTAATTTTTTCTTAAAT	Design primers
1296361	AGTAATAAGCAATAAATAATAAGTAATG	Design primers
1299065	ATTATTC-ACTATTC-ACTATTC-ACTATTC	Design primers
1302653	AAGAAGAAGATGAAGAAGAAGTAG	Design primers
1337172	CCACCTG-CAACCTG-CAACCTG-CAACCTG	Design primers
1339168	AAATTTTAGAAAAGTTTATAAAATATGAGA	Design primers
1341708	TTCTTCTAA-TTCTTCTAA-TTCTTTTAA	Design primers
1349974	GTTCAGG-GTTCGGG-GTTCGGG-GTTCGGG-GTTCGGG	Design primers
1351637	AAGTAAT-AAGTAAC-GAGTAAT-GAGTAAT-AAATAAT	Design primers
1359886	TTTTTAATTCTTAATTTTTAATTTTTGA	Design primers
1359920	ACTATTC-ACTATTC-ATTATTC-ACTATTC	Design primers
1364493	AAAAGGG-CAAAGGG-CAAAGGG-CAAAGGG	Design primers
1364599	CACCTGACACCTGCAACCTGAAACCTGA	Design primers
1382000	ACTTTTG-CCTTTTG-CCTTTTG-CCTTTTG	Design primers
1391086	GCAAGAG-GCAAGAG-GCAAGGG-GCAAGGG	Design primers
1391121	AAAAATTAAGAATTAAGAATTAAAAACT	Design primers
1394361	CCTTTGCCCCTTGCCCTTTTCACTTTGC	Design primers
1402913	GCAAGGGGCAAAGGGCAAGGGGCAAAGGGCAAAGG	Design primers
1405658	AGGTGTCAGGTTTCAGGTGGCAGGTTTCAGGTGTC	Design primers
1408339	GATGAGATGATGAGGTGATGAGGT	Design primers
1418492	AGTAATGAGTAACGAGTAACGAGTAATT	Design primers
1428862	AGGTGTCAGGTTTCAGGTGTCAGGTTTC	Design primers
1446521	ATTGATATTGAAAGTGATATTGCT	Design primers
1468439	CCACCTG-CAACCTG-CAACCTG-ACACCTG	Design primers
1474205	TAATGAGAGATAATCAGAGCAACTGAGAGA	Design primers
1475936	TTAATTTGATTAAATTTAAGTTAGT	Design primers
1476274	CCTATTG-CCTATTG-CCTCTTG-CCTCTTG	Design primers
1494635	ATACCTAATACCTGATATCTAATACCTG	Design primers
1497785	TTTTTAA-TTCTTAA-TTCTTAA-TTTTTAA	Design primers
1508207	ATAATTAAAAATTAAGAATTAAGAATTA	Design primers
1508262	CTAAAACCTGAAACCTGAAACCTAACAC	Design primers
1508343	ACCCCAACACCCTAACACCCTAAC	Design primers
1513927	GGAGTAA-TGAGTAA-CGAGTAA-CGAGTAA	Design primers
1516330	TTAAGAA-TTAAAAA-TTAAGAA-TTAAGAA-TTAAAAA	Design primers
1516381	CTTATTT-ATTATTT-ATTATTT-ATTATTT	Design primers
1516427	TCCCCTCATCACCTCATCCCCCCA	Design primers
1516460	ACCTGAAACCTGCAACCTGACACCTGAC	Design primers
1520791	AGGTTGCAGGTTGTAGATTGCAGGTTAC	Design primers
1521620	TTATTTTATGATTTTATGATTTTA	Design primers
1522843	TAGGCAATAGGGAACAGGCAACAGGCAA	Design primers
1537838	ATAATTAAGAATTAAAAATTAAAAATTA	Design primers
1537905	TCTCCTCATCTCCCCATCTCCTCCTCCCCTCATCACCTCA	Design primers
1546661	TATTATTAGTATTTTTATTATTAA	Design primers
1547662	TACTTATTACT-TACTTATTACT-TATTTATTATT	Design primers
1547713	CTCCCCTC-ATCCCCTC-ATCCCCTC	Design primers
1559979	TAATAGT-GAATAGT-GAATAGT-GAATAGT	Design primers
1560037	CTAAAAC-CTGAAAC-CTGAAAC-CTGAAAC	Design primers
1563426	TTGTTAC-TTATTAC-TTATTAC-TTATTAC	Design primers
1568345	GGGGATGGGAGGATGGGGGGATGA	Design primers
1569738	TAGGCAACAGGCAAGAGGCAAAAGGCAA	Design primers
1572193	TCCCCTCATCACCTCATCACCTCATCACCTCATCCCCCCA	Design primers
1572250	ACCTGCA-ACCTGCA-ACCTGAA-ACCTGAA	Design primers
1575218	ACCTGAC-ACCTGCC-ACCTGCC-GCCTGAC	Design primers
1579201	TTTTTAA-TTCTTAA-TTCTTAA-TTCTTAA	Design primers
1581110	GTAAATA-GTGAATA-GTGAATA-GTGAATA	Design primers
1598556	GAGTGGTTTATGAAACAAGATTTCTTATTGTTTATGAAACAAGATTTCTTATTGTTTATGAAACAAGATTTC	Design primers
1613201	TCCTATT-GCCTATT-GCCTATT-GCCTATT	Design primers
1619940	AATTATGTTAAATTATATGAAGTTATTTTA	Design primers
1621888	TCCCCTCATCACCTCATCCCCCCATCCCCTAA	Design primers
1624711	AATTAGTCATTAGTAATTAGTGATTAGT	Design primers
1639114	CCTTTGCCCCTTGCCCCTTGCCCTTTAC	Design primers
1647015	CCGAACTCCGAACCCTGAACTCCGAACT	Design primers
1657848	GAAACCTGCAACCTGTAACCTGTAACCT	Design primers
1669531	AAAAGGC-TAAAGGC-AAGAGGC-AAGAGGC-AAGAGGC	Design primers
1671159	TTTTTAATTCTTAATTATTAATTCTTAA	Design primers
1678687	ACCCCAATTCCCCAATATCCCAAT	Design primers
1695338	ATTCTTA-ATTCTTA-ATTTTTA-ATTCTTA	Design primers
1715158	TTACTCGTTACTGGTTACTCATTACTCC	Design primers
1715191	ACCTGACACCTGCCACCTGATACCTGCC	Design primers
1715224	TCCCCTCATCACCTCATCCCCCCA	Design primers
1716454	TCCCCTCATCACCTCATCCCCCCA	Design primers
1717839	CCACCTG-CAACCTG-CAACCTG-ACACCTG	Design primers
1720257	TCTCCTCATCACCTCATCCCCTCATCTCCTGA	Design primers
1726402	ACCTGCA-ACCTGCA-ACCTGAA-ACCTGCC	Design primers
1728232	ATTACTTA-ATTACTTA-ATTATTTA	Design primers
1733465	AAAGGGC-AAGGGGC-AAGGGGC-AAAGGGC	Design primers
1733503	AGTGTTGG-GGTGTTGG-GGTGTTGG	Design primers
1733567	AAACCTG-CAACCTG-CAACCTG-AAACCTG	Design primers
1735724	ACTCATT-ACTCATT-ACTCGTT-ACTTATT	Design primers
1748689	GAGGTTT-CAGGTTT-CAGGTTT-CAGGTTT	Design primers
1749102	AGTGTTGG-GGTGTTGG-GGTGTTGG	Design primers
1749148	ATTACTC-GTTACTC-ATTACTC-ACTACTC	Design primers
1749180	AAACCTG-ACACCTG-CAACCTG-CAACCTG-CAACCTG	Design primers
1758636	AACTATT-CACTATT-CACTATT-CACTATT	Design primers
1761843	ATTATCAACTATTCACTATTCACTATTCATTATTCACTATTCATTATTCACTATTCATTATTG	Design primers
1765591	GTTTGCC-TCTTGCC-TCTTGCC-TCTTGCC-TTTTGCC-TCTTGCC	Design primers
1769665	TTTCAGG-TTTCAGG-TTGCAGG-TTTTAGG-TTTTAGG	Design primers
1772374	CCACCTG-CAACCTG-CAACCTG-CAACCTG	Design primers
1775757	AGAGGTTTCAGGTG-TCAGGTTTCAGGTG-TCAGGTTTCAGGTG-TCAGGTTTCAGGTG	Design primers
1802988	AGGGAAT-AGGGAAT-AGGCAAT-AGTGAAT	Design primers
1803017	GTTAAGA-ATTAAGA-ATTAAGA-ATTAAGA-ATTAAGA	Design primers
1829381	GATGATGATGTTGAGGATGATTAT	Design primers
1835024	TTTTTAATTCTTAATTTTTAATTCTTAA	Design primers
1837316	AGTAATAAATAATAAGTAATAAATAATA	Design primers
1864221	TGAATTA-AGAATTA-AGAATTA-AGAATTA	Design primers
1866404	TTAATAG-TGAATAG-TGAATAG-TGAATAG	Design primers
1866438	ATTACTCGTTACTCGTTACTCGTTACTCATTACTT	Design primers
1866477	CTAAAAC-CTGAAAC-CTGAAAC-CTGAAAC	Design primers
1872027	GGAGATGAGGGGATGAGGGGATGA	Design primers
1874953	CCCCATCACCTCATCACCTCATCA	Design primers
1880694	GTTTGCC-TTTTGCC-TTTTGCC-TTTTGCC	Design primers
1882217	GAGTAGGGAGTGGGGAGTAGGGAGTAGG	Design primers
1882356	AACTCCG-AACTCCG-AACCCCG-AACTCCG	Design primers
1888714	AGTAATTAGGAATTAGCAATTAGGAATT	Design primers
1895844	AATAGTT-GATAGTT-GATAGTT-GATAGTT	Design primers
1895873	ATAATTA-AGAATTA-AGAATTA-AGAATTA-AGAATTA	Design primers
1905417	GATGAGGTGATGAGATGATGAGGG	Design primers
1909279	AAAAATTAAGAATTAAGAATTAAAAACT	Design primers
1911190	CGAGGCA-AGAGGCA-AGAGGCA-AGAGGCA	Design primers
1911220	AGTAGAT-AGTGAAT-AGTGAAT-AGTGAAT-AGTGAAT-AGTGAAT	Design primers
1935505	ATCAACTATTAACTATTAACTATTAACTATTAACTATTCACT	Design primers
1936777	ATAATTA-AGAATTA-AAAATTA-AAAATTA-AAAATTA-AGAATTA	Design primers
1936849	AAACCTG-AAACCTG-ACACCTG-AAACCTG	Design primers
1938805	TCCCCTCATCACCTCATCACCTCA	Design primers
1945266	AGGTGTCAGGTTTCAGGTGTCAGGTGTC	Design primers
1945331	CCATTGC-CTATTGC-CTATTGC-CTATTGC	Design primers
1949926	TTAGGTT-TCAGGTT-TCAGGTT-TCAGGTT-TCAGGTT	Design primers
1959954	ATCTTA-CTCTTA-CTCTTA-CTCTTA	Design primers
1977596	ACCTGCA-ACCTGAA-ACCTGAA-ACCTGAA-ACCTGAA	Design primers
1984103	AATGAAA-AATTAAA-AATTAAA-AATTAAA	Design primers
1987282	TTCATTC-TTAATTC-TTAATTC-TTAATTC	Design primers
1988514	TTTTTAA-TTCTTAA-TTCTTAA-TTCTTAA	Design primers
1995150	AGGTTTC-AGGTTTC-AGGTGTC-AGGTTGC-AGGTGTC	Design primers
1999487	GTTAATAGTGAATAGTGAATAGTTAATG	Design primers
2003706	TACTCATTACTCCTTACTGATTACTCAT	Design primers
2010301	AGGTTTCAGGTTGCAGGTGTCAGGTGTCAGGTTTA	Design primers
2013611	TCACTATTCACTACTCAATATTCACTATTCACTCT	Design primers
2019647	GAGTTAGGAATTAGGAGTTAGGGGTTAG	Design primers
2022331	TGAATAG-TGAATAG-TCAATAG-TCAATAG	Design primers
2022365	ATTACTCGTTACTCGTTACTCATTACTT	Design primers
2028247	GGCAAGA-GGCAAGA-GGCAAAA-GGCAAGA	Design primers
2028842	AACTCCT-AACTCCT-AATTCCT-AACTCAT	Design primers
2038752	AATTAAG-AATTAAG-AATGAAG-AATTAAA	Design primers
2038808	AAACCTG-AAACCTG-ACACCTG-ACACCTG	Design primers
2044318	AAGAATTAAGAATGAAAAATTAAGAATT	Design primers
2047545	ACACCTGAAACCTG-CTACCTGAAACCTG-CTACCTGAAACCTG	Design primers
2052424	ACCCTAAGCCCCTAATCCCCTAACACCCTAATTCCCTAATCCCCTAAT	Design primers
2065387	TTTTTAA-TTCTTAA-TTCTTAA-TTCTTAA	Design primers
2068136	GGAGATGAGGGGATGAGGGGATGA	Design primers
2068230	TTTTTAA-TTCTTAA-TTCTTAA-TTCTTAA	Design primers
2068289	TTGCCCCCTGCCCCTTGCCCTTTTCCCC	Design primers
2078312	AACCTGCCACCTGCAACCTGAAACCTGC	Design primers
2079175	TTGAGAA-TTAAGAA-TTAAGAA-TTAAGAA	Design primers
2083612	TTGAGAA-TTAAGAA-TTAAGAA-TTAAGAA	Design primers
2099152	TGGTGAGGTGATGAGGTGATGAGG	Design primers
2099236	AAGTAAT-AAGTAAC-GAGTAAT-GAGTAAT-GAGTAAT	Design primers
2099309	AACTATT-CACTATT-CACTATT-CACTATT	Design primers
2104432	CAAAGGT-AAATAGT-TAATAGT-TAATAGT-TAATAGT-TAATAGT-TAATAGT-TAATAGT-TAATAGT-TAATAGT-TAATAGT-TAATAGT-TAATAGT-TAATAGT-TAATAGT	Design primers
2104546	ATAATTA-AAAATTA-AGAATTA-AGAATTA-AGAATTA	Design primers
2106944	TTGAGAA-TTAAGAA-TTAAGAA-TTAAGAA	Design primers
2109025	ACTCATT-ACTCATT-ACTCGTT-ACTTATT	Design primers
2119977	AAACCTGCAACCTGAAACCTGAAACCTAAAACCTA	Design primers
2126524	TCCGAACTCCAAACCCCGAACTCCAAAC	Design primers
2130344	AGGTGTC-AGGTGTC-AGGTTTC-AGGTTTC	Design primers
2143174	CCTATTG-CCTATTG-CCTCTTG-CCTCTTG	Design primers
2146278	ATTCTTA-ATTCTTA-ATTTTTA-ATTCTTA-ATTCTTA	Design primers
2153787	TCATCACCTCATCACTTCATCCCC	Design primers
2169288	GGTGTCAGGTGTCGGGTTTCAGGTATCA	Design primers
2173281	GCAAAGGGCAAGGGGCAAAAGGCAAAGG	Design primers
2175928	ATTACTCGTTACTCGTTACTCATTACTT	Design primers
2175960	CTAAAAC-CTGAAAC-CTGAAAC-CTGAAAC	Design primers
2176010	CCTCATCCCCTCATCTCCCCATCC	Design primers
2194123	CAATTAA-CAATTAA-AAATTAA-CAATTAA	Design primers
2198344	TTAAGAATTAAGAATAAAAAATTAAGAATTAAGAATGAAAAA	Design primers
2198435	TCCCCTCATCCCCCCATCCCCTAA	Design primers
2204105	AGGTGTCAGGTTTCAGGTGTCAGGTTTC	Design primers
2213865	CCTACCA-CCTGCAA-CCTGCAA-CCTGCAA-CCTGCAA-CCTGCAA	Design primers
2214020	CCTTTGCCCCTTGCCCTTTGCCCTTTGC	Design primers
2232106	ATTACTCGTTACTCATTACTCATTATTC	Design primers
2242112	AGTAATGAGTAACGAGTAACGAGTAATA	Design primers
2243312	AACTATTCACTATTTACTATTCACTATT	Design primers
2248330	AGGGGATGGGGGGATGAGGTGATG	Design primers
2248373	TTTTTAA-TTCTTAA-TTCTTAA-TTTTTAA-TTCTTAA	Design primers
2256943	AACTATT-CACTATT-AACTATT-AACTATT	Design primers
2259544	AAGTAATAAGTAACGAGTAATGAGTAAT	Design primers
2259605	CCCCAACA-CCCCAACA-CCCCAACA	Design primers
2261052	TCCCCTCATCACCTCATCCCCTCA	Design primers
2264040	ATAATTA-AGAATTA-AAAATTA-AAAATTA-AGAATTA	Design primers
2264159	ACACCTGAAACCTGAAACCTGACACCTA	Design primers
2269975	TATTCACTATTTACTATTCACTATTCAT	Design primers
2271782	TAGTGAATAATGAATAGTGAATAGTTAA	Design primers
2278764	GGTCATGGGGGTCATGGAAGTCATGGG	Design primers
2282081	ATTAGTG-AATAGTG-AATAGTG-AATAGTG	Design primers
2282127	ATTACTC-GTTACTC-GTTACTC-ATTACTC-ATTACTC-ATTACTC	Design primers
2282173	AAACCTGACACCTGCAACCTGCAACCTG	Design primers
2283846	TAATTACTAATTCCTAATTATTAATTGC	Design primers
2290524	AAAAAGT-AATAAGT-AATAAGT-AATAAGT	Design primers
2290587	ATTATTC-ACTATTC-ACTATTC-ATTATTC-ATTATTC-ATTATTC-ACTATTC	Design primers
2296968	TCCCCTCATCCCCTTATCTCCTCATCCCCTAA	Design primers
2305402	TCATCTTCA-TCATCTTCA-CCATCTTCA	Design primers
2320883	AAATAGT-GAATAGT-GAATAGT-GAATAGT	Design primers
2320913	AAAATTA-AGAATTA-AGAATTA-AGAATTA	Design primers
2321018	GCACCTG-CAACCTG-CAACCTG-CAACCTG-CAACCTG-CAACCTG	Design primers
2323476	TCGGGTT-TCAGGTT-TCAGGTT-TCAGGTT	Design primers
2323513	AGTAATGAGTAACGAGTAACGAGTAATT	Design primers
2323545	ACTACTC-ACTATTC-ACTATTC-ACTACTC-ACTATTC	Design primers
2324496	CGACGACGACGACGGCGACGACTA	Design primers
2330408	ATTTCAGGTGTCAGGTATCAGGTGTCAGGTATCAGGTGTCAG	Design primers
2340033	AGGTTTCAGGTGTCAGGTTTCAGGTTGC	Design primers
2346555	GGCAAAG-GTGAATA-GTGAATA-GTGAATA-GTGAATA-GTGAATA-GTGAATA-GTGAATA-GTGAATA-GTGAATA-GTGAATA-GTGAATA	Design primers
2349886	TTAATTCCTAATTCCTAATTCTTAATTT	Design primers
2349956	TTTGCCT-CTTGCCT-CTTGCCT-CTTGCCT	Design primers
2360870	TA-TT-GT-TA-AT-TA-TT-AT-TA-AT-TT-TT-GT-TT-AT	Design primers
2366654	GCAATTAGTAATTAGGAATTAGTAATTA	Design primers
2366690	CCTGAAACCTGACACCTAAAACCTGAAA	Design primers
2392220	TAAGTAA-TGAGTAA-TGAGTAA-TGAGTAA	Design primers
2392276	TTTTTAATTCTTAATTTTTAATTCTTAA	Design primers
2395435	TTTTTAA-TTCTTAA-TTCTTAA-TTGTTAA	Design primers
2398336	AGGTATCAGGTGTCAGGTATCAGGTGTC	Design primers
2398667	GCCTCTT-GCCTCTT-GCCTTTT-GCCTTTT	Design primers
2399029	TCCTGAA-ACCTGAA-ACCTGAA-ACCTGAA	Design primers
2407353	TTTGCACCAGTGAGATTTGCCCCACTGAGATTTGCTTCATTGAGA	Design primers
2417731	AAAAATAAAAAAAAAATTACAAAT	Design primers
2420547	AAAGGGC-AAGGGGC-AAGGGGC-AAGGGGC	Design primers
2420652	CATCCCCTCATCCCCCCATCACCT	Design primers
2422906	TTAATTACTAATTATTAATTCTTCATTATTAATTT	Design primers
2432307	TTAGGACAATTAGGACTATTTGGACAA	Design primers
2439903	AGGTTTAGGCTTTGGTTTAGGTTT	Design primers
2441261	ATCAAAATATATCCAAATAGATCAAGATTT	Design primers
2443614	TTTTTAA-TTTTTAA-TTCTTAA-TTCTTAA	Design primers
2451796	AAAAATTAAGAATTAAGAATTAAAAACT	Design primers
2451896	ACCTGCA-ACCTGAA-ACCTGAA-ACCTGAA	Design primers
2457176	ACGCAAAG-GCGCAAAG-GCGCAAAG	Design primers
2463505	AGGTTTAGGATTTGGTTTAGGTTT	Design primers
2466791	ACTTGAA-ACCTGAA-ACCTGAA-ACCTGAA	Design primers
2508982	ACTCATTACTTATTACTCGTTACTCATT	Design primers
2527730	TGAGGAGAAGAGGAGATGAGGAGA	Design primers
2530169	TTTGCCT-TTTGCCT-CTTGCCT-CTTGCCT	Design primers
2531822	GCAAGGGGCGAGGGGCAAGGGGCAAAGG	Design primers
2532050	TCCCCTCATCACCTCATCCCCTCATCCCCTCATCCCCTAA	Design primers
2532208	AATACCCTAATACCCCAATACCTT	Design primers
2533105	GCCTCTT-GCCTCTT-GCCTTTT-GCCTTTT	Design primers
2533463	TCCTGAA-ACCTGAA-ACCTGAA-ACCTGAA	Design primers
2537811	TGTCAGG-TTTCAGG-TTTCAGG-TTTCAGG	Design primers
2549454	AGGTTTAGGCTTTGGTTTAGGCTT	Design primers
2556340	AACACCCCAACACTCCAACACCCTAACACCTC	Design primers
2562957	AGGTTTCAGGTGTCAGGTTGCAGGTGTCAGGTTTA	Design primers
2562994	GGAGTAA-TGAGTAA-CGAGTAA-CGAGTAA	Design primers
2575440	CCTATTG-CCTATTG-CCTCTTG-CCTCTTG	Design primers
2582256	TCCCCTCATCACCTCATCCCCTCATCCCCTAA	Design primers
2588266	ATCAGGTGATGAGGTGATGAGGTG	Design primers
2622961	AGGTATTA-GGGTATTA-GGGTATTA	Design primers
2622986	GGGATGAG-GTGATGAG-GTGATGAG-GTGATGAG-GTGATGAG	Design primers
2623068	AGTAATG-AGTAATG-AGTAACG-AGTAATT	Design primers
2638759	GGGCAAGGGACAAGGGGCAAAGGGCAAA	Design primers
2644645	ACCTGAC-ACCTGCC-ACCTGCC-GCCTGAC	Design primers
2654166	AAGTAATAAGTAACGAGTAATGAGTAAT	Design primers
2654226	ACTATTC-ACTATTC-ACTATTC-ACTATTC-ACTATTT	Design primers
2667802	TAGGCAACAGGCAATAGGCAATAGGTAATAGGCGA	Design primers
2672393	ATTACTCGTTACTCGTTACTCGTTACTCATTACTT	Design primers
2672465	TCCCCTCATCACCTCATCCCCTCA	Design primers
2672490	CACCTGCAACCTGCCACCTGACACCTGA	Design primers
2673495	AGAAATTAGCAATTAGTAATTAGTAATT	Design primers
2687007	ATAGGCAAGAGGCAAAAGGCAAGAGGCA	Design primers
2688799	GAGGTTT-CAGGTTT-CAGGTTT-CAGGTTT	Design primers
2689162	AAAAGGC-AAAAGGC-AAGAGGC-AAGAGGC	Design primers
2689485	AAACCTGACACCTGATACCTGACACCTG	Design primers
2698526	AATTGCTAGTTTTAATTGCTAGTTCTAATTGCTAATTCT	Design primers
2699266	TAATGAA-TAGTGAA-TAGTGAA-TAGTGAA	Design primers
2699332	CACTCAT-TACTCAT-TACTCAT-TACTCAT	Design primers
2708841	ACACCTGAAACCTGTCACCTGAAACCTG	Design primers
2710150	TAATTAA-GAATTAA-GAATTAA-GAATTAA	Design primers
2710908	CAGGTTGCAGGTGGCAGGTTTCAGGTTG	Design primers
2711006	TATCAAC-TATTCAC-TATTCAC-TATTCAC-TATTCAC-TATTCAC	Design primers
2714709	GAGGTTT-CAGGTTT-CAGGTTT-CAGGTTT	Design primers
2715076	AAAAGGC-AAAAGGC-AAGAGGC-AAGAGGC	Design primers
2715236	CCTGACACCTGATACCTGACACCTGATA	Design primers
2719288	TCCCCTCATCACCTCATCACCTCA	Design primers
2729945	TAGTGAA-TAGTTAA-TAGTTAA-TAGTTAA-TAGTTAA	Design primers
2732651	GGGGATGAGGTGATGAGGTGATGA	Design primers
2732737	AAGTAATAAGTAACGAGTAATGAGTAAT	Design primers
2732775	AGTTATT-AATTATT-AATTATT-AATTATT-AATTATT	Design primers
2738369	CCTGAAACCTGTAACCTGCAACCTGAAACCTGAAGCCTGAAACCTGACA	Design primers
2741048	AAGTAAT-GAGTAAT-GAGTAAT-GAGTAAT	Design primers
2744584	ACTCATT-ACTCATT-ACTCGTT-ACTTATT	Design primers
2748135	CTCTAAACCTTTTTCCAAACCTTTCGCTAAACCTCT	Design primers
2750730	CCACCTGCAACCTGCAACCTGCAACCTGACACCTG	Design primers
2761933	TCAGGTGGCAGGTGGCAGGTGTCAAGTG	Design primers
2773080	ATAATTA-AGAATTA-AGAATTA-AGAATTA	Design primers
2773134	TCTAAAA-CCTAAAA-CCTAAAA-CCTAAAA	Design primers
2773163	CTGCAAC-CTGAAAC-CTGAAAC-CTGAAAC	Design primers
2785224	TAATTTT-TAATTTT-TAATTCT-TAATTCT-TAATTCT-TAATTCT-TAATTCT-TAATTAT	Design primers
2789052	AGGTGTC-AGGTGGC-AGGTGGC-AGGTGGC	Design primers
2799978	TAATAATCA-AAATAATCA-AAATAATCA	Design primers
2803466	ACTACTC-ACTATTC-ACTATTC-ACTATTC	Design primers
2818051	GATTGCTAATTGCTAATTGCTGATTACT	Design primers
2825220	TTTTTAA-TTCTTAA-TTCTTAA-TTCTTAA	Design primers
2825253	CCTTTGCCCCTTGCCCATTGCCCTTTGC	Design primers
2828490	CCACCTG-CAACCTG-CAACCTG-ACACCTG-ACACCTG-ACACCTG	Design primers
2835777	CCACCTG-CAACCTG-CAACCTG-CAACCTG	Design primers
2835880	TAGAGGCG-ATGAGGTG-ATGAGGTG-ATGAGGTG-ATGAGGTG-ATGAGGTG	Design primers
2835989	ACTATTC-ATTATTC-ATTATTC-ACTATTC	Design primers
2853145	GATTATTTAGTTTCCAACTTTATTCTCTAGTTTCTAACTTTATTATTCGGTTTCCAACTT	Design primers
2853689	TAGGCAA-GAGGCAA-GAGGCAA-TAGGCAA	Design primers

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

6018

ATTACTCGTTACTCGTTACTCATTACTT