Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Microcoleus sp. PCC 7113

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
5522	CTTCATA-CTTCATA-CTTCCTA-CTTCATA	Design primers
25003	CTGCCTTCTGCCTCCTGACTTCTGCCTT	Design primers
76605	TTCATCC-TTCATCC-TTTATCC-TTCATCC	Design primers
87280	AGTCTGTGACCCATTATT-TCTCTGTGACCCATTATT-TCTCTGTGGCCCATTATT	Design primers
117681	AAGTTTTGATGAAATTTTTATGAAGTTTTAATG	Design primers
139162	CCTTCTGTCTTCTGCCTTCTGCCTTCTT	Design primers
199034	CTCCCCCG-CTCCCCCG-CTCCCCTG	Design primers
218350	AGCAGGGGAGCGGGGGAGCAGGGG	Design primers
226995	ATGGGTA-ATTGGTA-ATTGGTA-ATTGGTA	Design primers
228231	AAGGCAG-GAGGCAG-GAGGCAG-AAGGCAG-AAGGCAG-AAGGCAG-AAGGCAG-AAGGCAG	Design primers
289376	TGGTAAT-GGGTAAT-GGGTAAT-GGGTAAT	Design primers
291915	AGGGGGACA-AGGGAGACA-AGGGGGATA-AGGGGGATA-AGGGGGACA	Design primers
333037	TCATGCCGACTTGAGCGGTGCCGACTTGAGTCGTGCTGACTTGGG	Design primers
340123	CCCCTCAGGTTGGCACCTCTGAGATTGGCACCTCTGAGATTGGCA	Design primers
342042	GGTGTCACTGAGGTTGGCACCACTGAGGTT-GGCATCACTGAGGTTGGCACCACTGAGGTT-GGCACCACTGAGGTTGGCACCACTGAGGTT	Design primers
343879	GGCTTGGGGATTGGGACTTGGGGATTGG	Design primers
357208	TCCCATT-ACCAATT-ACCAATT-ACCAATT-ACCAATT-ACCAATT	Design primers
379853	AATCCAAAATCTAAAATCCAAAATCCCA	Design primers
387470	AATCCAAAACCCAAAACCCAAAATCTAA	Design primers
394330	AGCAGAA-GGCAGAA-GGCAGAA-GGCAGAA	Design primers
394413	CCTCAGCA-CCTCAGCA-CCCCAGCA	Design primers
394438	CCCCGCACCCCAGCACCCCCGCAC	Design primers
407686	TATTATTCCTTTTATTCCTTTTATTCC	Design primers
426699	CCTTTTGCCTTCTGCCCTTTGCCTTCTG	Design primers
473294	GAC-ATC-ATC-ATC-GAG-ATC-ATC-ATC-ATC-ATC-ATC-ATC	Design primers
497709	AGAAGGC-AGGAGGT-AGGAGGT-AGGAGGT-AGAAGGC-AGAAGGC-AGGAGGT-AGGAGGT-AGAAGGC-AGGAGGT	Design primers
506190	GACAAGGGGGACAAGGAGGACAAGGGG	Design primers
532779	TTTCTTTATTTCTTTTTATCTTTA	Design primers
537739	TCTTCTG-CCTTCTG-CCTTCTG-CCTTCTG	Design primers
540081	TATAGCA-AAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-AAAGGCA-GAAGGCA	Design primers
561724	GGGATGGAGAGG-GAGTTGGAGAGG-GAGTTGGAGAGG-GAGTTGGAGAGG	Design primers
568832	AATCTTGAAGGAGCCAATTTACAAGGAGCCAATTTACAAGGAGCC	Design primers
653544	TATATTT-TAGATTT-TAGATTT-TAGATTT	Design primers
664833	GGGGTGTGGGGTGTAGGGTGTGGGGTGT	Design primers
691178	AAAGAT-AGAGAT-AGAGAT-AGAGAT	Design primers
809099	AATGGGT-AATCGGT-AATCGGT-AATGGGT	Design primers
812458	AAAGGCAGAAGGCAAAAGGTAAAAGGTA	Design primers
830263	GAGTGGGAGAGATGGGGAGCGGGGGAGATGGGGAGATGGGGAGATGGG	Design primers
874288	AAGCTGGG-GAGCCGGG-GAGCTGGG-GAGCTGGG-GAGCTAGG-GAGCTGGG-GAGCTGGG-GAGCTGGG	Design primers
881733	CATCTCCTCAGCACCCCCGCACCTCAGCACCCCAGCACCTCAGAACCC	Design primers
884758	AAGCCTT-CTACCTT-CTGCCTT-CTGCCTT-CTGCCTT-CTGCCTT-CTAACTT-CTACCTT-CTGCCTT	Design primers
884824	CCTTCTG-CCTTCTA-ACTTCTA-CCTTCTA-ACTTCTG-CCTTCTG-CCTTCTG-CCTTCTA-CCTTCTA-CCTTCTA-CCTTCTA-CCTTCTA-CCTTCTG-CCTTCTG-CCTTCTG-CCTTCTG	Design primers
925412	CTTCTGCCATCTGCCTCCTGCCTCCTGC	Design primers
930661	AATAAAACGATGCAACAATAAATAAAGCGGTTCGACAATAAATAAAGCGATTGAACAATT	Design primers
972062	CTCAAGGTTGGCTCCCTCAAAGTTAGCTCCTGTAAGGTTGGCTCC	Design primers
972617	ACTCAGGTTGGCGTGGCTCAGGTTAGCGCGACTCAAGTTAGCGCGACTCAGGTTAGTGCG	Design primers
981865	ACCCATTACCGATTACCGATTACCCAGT	Design primers
1007311	CCTCAG-TCTCAG-TCTCAG-TCTCAG	Design primers
1032149	TAGCCTTCAACTTCAAAACCTTCAACTTTAAAACCTTCAACTTTA	Design primers
1037730	GGCGGACAAGGGGGACAAGGGGGACAA	Design primers
1056617	TTAGTGG-TTAGTGG-TTAGTCG-TTAGTCG	Design primers
1063537	ATGGAGCCAATCTCAGTGGTGCCAACCTCAGTGGTGCCATTCTCA	Design primers
1068156	TTGCCA-TTACCA-TTACCA-TTGCCA	Design primers
1093085	GCGGGGGAGCTGGGGAGCTGGGGA	Design primers
1100675	TTTCCTGGCGGTTGACTGGCGGTTGACTGGCGG	Design primers
1114777	CACACCC-CACACCC-TACACCC-CACACCC	Design primers
1118050	TTTTACC-CATTACC-CATTACC-CATTACC-CATTACC-CATTACC	Design primers
1136479	AAGGCAGAGGGCAGGAGGCAGGAGGCAG	Design primers
1162949	GCAAAAG-GCAGAAG-GCAGAAG-GCAGAAG-GCAGAAG	Design primers
1223517	GA-TA-GA-AA-TA-GA-GA-TA-GA-TA-TA-GA	Design primers
1232612	TTCTGAATCATCTAAATC-ACCTGAATCATCTAAATC-ACCTGAATCATCTGAATC	Design primers
1232667	CCTGAATCA-CCTGAATCA-TCTGAATCA-TCTGAATCA	Design primers
1238735	AAGCACCC-CAGCACCC-CAGCACCC-CAGCACCC	Design primers
1241730	AAGGCAGATGGCAGGAGGCAGGAGGCAG	Design primers
1252367	CAAGCC-CAACCC-CAACCC-CAACCC	Design primers
1252401	TCCAAC-CCCAAC-CCCAAC-CCCAAC-CCCAAC	Design primers
1252463	CAAGCC-CAACCC-CAACCC-CAACCC	Design primers
1346440	TGCTCTTGCTGTTGGTCTTGCTGT	Design primers
1378146	AAAACCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT	Design primers
1402007	CGGCACCCGCACCGGCACCGGAAC	Design primers
1443710	CCCCCGCACCCCAGCACCCCAGCCCCCCCGCACCCCCGCACCCCAGCA	Design primers
1447370	GTCCCAT-TACCTAT-TACCCAT-TACCCAT-TACCCAT-TACCCAT-TACCCAT-TACCCAT-TACCTAT	Design primers
1465686	TCTCCCCA-TCTCCCCA-TCTCCCTA	Design primers
1484206	AACCTGCAACTTGCAACCTTCAACTTGC	Design primers
1509086	GCGGTGGCAGTGGCGGCGGCGGTGGGGGTG	Design primers
1520668	ACCGATG-ACCAATG-ACCAATG-ACCGATG	Design primers
1535969	GTGCAAGCAGGGGAGCGGGGGAGCAGGGGAGCGGGGGAGCAGGGGAGC	Design primers
1628405	TGGTAAT-CGGTAAT-CGGTAAT-TGGTAAT-TGGTAAT	Design primers
1697533	TGGGGAGCTGAGGAGCTGAGGAGC	Design primers
1759318	TCTTTCCTCTTTTTCCTCTCTTTCCTC	Design primers
1782604	GAAGGGGGA-CAAGGGGGA-CAAGGGGGA	Design primers
1786670	GGGGTGTGGGGTGTAGGGTGTGGGGTGT	Design primers
1787600	CCAATCTCACGGGAGCTAATTTGACGGGAGCTAATTTGACGGGAG	Design primers
1809243	TCGCTCAGCCCGTTGTGTTTCCTGTTCAGCCCGTTGTGTTTCCTGTTCAGCTCGTTGTGTTTC	Design primers
1824316	GTTAACCTTCAACCTGTTAACCTTCAACTCGATAACGTGCAACCT	Design primers
1917579	CCTTCTGCCTCCTGCCTCCTGCCTCCTGCCTTCTT	Design primers
1934995	CGTCTCCG-CGTCCCCG-CGTCCCCG-CGTCCCCG	Design primers
1950622	CTCCTCAGCTCCTTAGCTCCTCCGCTCCTCCG	Design primers
1971012	GGCTAT-GGTTAT-GGTTAT-GGATAT	Design primers
1984918	GGGGTATGGGGGATGGGGTGTGGGGTGT	Design primers
1985258	AAAACACCCCACACCCTACAC-CCCACACCCCACACCCTACAC-CCCACACCCCACACCCCACAC	Design primers
1992546	TAATTGC-GAATTGC-GAATTGC-GAATTGC	Design primers
2120673	CCCCCCCAACCCCCCACCCCCCCG	Design primers
2130255	CATTACC-TATTACC-CATTACC-CATTACC-AATTACC	Design primers
2197379	CCCAACACCCCAGCACCTCAGCACCCCAACACCCCAGCACCCCAGCTA	Design primers
2228939	GCCATTA-CCCATTA-CCCATTA-CCCATTA-CCCATTA	Design primers
2246285	AG-CA-GG-GG-AG-CG-GG-GG-AG-CG-GG-GG-AG-CG-GG-GG	Design primers
2247902	CTCCCCAGCTCCCCGGCTCCCCAG	Design primers
2252582	AAATCTCC-CCTGCTCC-CCTGCTCC-CCTGCTCC-CCTGCTCC-CCTGCTCC-CCTGCTCC-CCTGCTCC-CCTGCTCC	Design primers
2282517	TCTGCCC-TTTGCCC-TCTGCCT-TCTGCCT-TCTGCCT-TCTGCCT	Design primers
2312756	GGCTTT-GGCTTT-GGGTTT-GGCTTT	Design primers
2326743	ATCTTG-ATATTG-ATATTG-ATATTG	Design primers
2338814	AAGTCATCATCA-AAGTCATCATCA-AAGTCGTCTTCA-AAGTCATCTTCG	Design primers
2339171	TCCTCTTCATCCCCTTCATCTTCTTCA	Design primers
2345810	CCTTCTGCCGTCTGCCTTCTGCCTTATG	Design primers
2357105	CACACCC-CACACCC-TACACCC-CACACCC	Design primers
2370061	ACTTTATGTAG-TATTTATGTAG-TATTTATGTAG	Design primers
2414597	AACCCA-CACCAA-CACCAA-CACCAA-CACCAA-CTCCAA-CACCAA-CACCAA-CACCAA	Design primers
2414662	ACGCCA-ACACCA-ACACCA-ACGCCA	Design primers
2414692	ACGCCAACACCAACGCCAACACCAACGCCA	Design primers
2414728	ACGCCA-ACTCCA-ACTCCA-ACTCCA-ACACCA	Design primers
2414790	TCCAACGTCAACTCCAACTCCAACGCCAACGTCAACTCCAACCCCAAC	Design primers
2414849	CGCCAACTTCAAGTTCAACGCCAACTTCAACGCCAACGCCAACTCCAACTCCAA	Design primers
2420191	ACTGGGT-AATGGGT-AATGGGT-AATGGGT	Design primers
2453984	AAATTAC-CCATTAC-CCATTAC-CCATTAC-CCATTAC-CCATTAC	Design primers
2463512	CAGCTCCC-CCGCTCCC-CCGCTCCC-CCGCTCCC	Design primers
2516996	AATCCAAAATCTAAAATCCAAAATCTAA	Design primers
2589289	CTGCCTTTTGCCTTCTGCCTTCTGCCTC	Design primers
2599531	CCCCAGCTCCCCTGCTACCCAGCT	Design primers
2654046	CCTTCTG-CCTCCTG-CCTCCTG-CCTTCTG	Design primers
2677512	CTTTTGC-CTTCTGC-CTTCTGC-CTTTTGC	Design primers
2711447	GCTCAAGTTAGCCCCACTCAAATTAGCACCACTCAAGTTAGCCAC	Design primers
2716815	TGAAGGGGGTGAAGGTGGTGAAGGTGG	Design primers
2721137	TCCGCACC-TCCGCACC-CCCGCACC-CCCGCACC	Design primers
2730867	AGGGAGACAAGGAAGACAAGGAAGACAAGGAAGACAAGGGGGACAAGGGAGAGA	Design primers
2737058	CATCCCA-AATCCCA-AATCCCA-AATCCCA	Design primers
2757352	CCATTACCAATTACCAATTACCCATTAG	Design primers
2762155	GAG-GAG-GAG-GGG-GAG-GCG-GGG-GAG	Design primers
2771487	GGGAGCTGGGGAGCCGGGGAGCTG	Design primers
2771587	AGGGAGACAAGGAAGACAAGGGGGACA	Design primers
2786766	GGCGGGGG-AGCTGGGG-AGCTGGGG-AGCTGGGG-AGCTGGGG-AGCCGGGG	Design primers
2826305	TCTCCCCATCTGCCCAGCTCCCCA	Design primers
2834016	CGCTCCTCAGCTCCTCAGCTCCCCCGCTCCCCCGCTCCCCCGCTCCCCCGCTCCTCAGCTCCCCCGCTCCCC	Design primers
2872485	CCAACCCCAAGCTCAACCCCAAGC	Design primers
2882378	TCACTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC	Design primers
2899036	CCTCAGCACCTCATCACCTCAGCACCTCAGCACCTCAGCT	Design primers
2902867	GCAAAAG-GCAGGAG-GCAGAAG-GCAGGGG-GCAGAAG-GCAGGAG-GCAGAAG-GCAGAAG-GCAGATG-GCAGGAG	Design primers
2902938	CAGGAGG-CAGGGGG-CAGGGGG-CAGGGGG-CAGGGGG-CAGGAGG-CAGGAGG-CAGGAGG	Design primers
2902995	AGATGGC-AGGAGGC-AGGGGGC-AGGAGGC-AGATGGC-AGATGGC-AGATGGC-AGATGGC	Design primers
2922334	TCTTCCTCTTCTTCTTTCTCCTCCTGTTCC	Design primers
2922389	GAGGGGGTGGGGGAGGAGGGGGGG	Design primers
2931139	GATGAATAATC-GATGAATAATC-GATGAATTCTC	Design primers
2938029	CAAGGTTGGCTCCAC-TCAAGTTGGCTCCAC-TCAAGTTGGCTCCAC-TCAAGTTGGCTCCAC-TCAAGTTGGCTCCAC	Design primers
2966176	CAAGAAAAAGAACAAGAGCAACAA	Design primers
2971971	CTCCCCCGCTCCCCTGCTCCCCTGCTCCCCTG	Design primers
2989074	GGGGTGTGGGGTGTAGGGTGTGGGGTGT	Design primers
3026845	CTAAGC-CAAAGC-CTAAAC-CTAAAC-CTAAAC	Design primers
3029760	ATTTTAGATTTCAGATTTTAGATTTTAG	Design primers
3031764	TAGGCAA-AAGGCAA-AAGGCAA-AAGGCAA	Design primers
3033851	CTTCTGCCTTCTACCTTCTGCCTTCTAC	Design primers
3035468	AAACCTTCTACCTCCTGCCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTTCTACCTCCTGCCTT	Design primers
3060443	GGGGTGTGGGGTGTAGGGTGTGGGGTGT	Design primers
3104523	ATTTTGA-CTTTTGA-CTTTTGA-CTTTTGA	Design primers
3108634	GGTAATCGGTAATGGGTCATCGGTAATGGGTCATC	Design primers
3168258	TCCTCAA-TCCCCAA-TCCCCAA-TCCCCAA	Design primers
3170837	ATCTAAAATCCAAAATCTAAAATTTAAA	Design primers
3181518	CTCCCCCGCACCCCAGCACCCCAGCACCCCCGCACCCCCGCACCCCAGCACCCCCGCTCCCCCG	Design primers
3192570	CCTTCTGCCGTCTGCCTCCTGTCTTCTG	Design primers
3208886	AGGGAGACAAGGAAGACAAGGAAGACA	Design primers
3231356	GCAAAAG-GCAAAAG-GCAGAAG-GCAAAAG-GCAGAAG	Design primers
3298481	GGAGTT-GGAGTT-GGTGTT-GGTGTT-GGAGTC	Design primers
3298838	GGCGAG-GGTGAG-GGTGAC-GGTGAG-GGTGAG-GCTGAG	Design primers
3299194	TGGTGTTGTTGGTACGGGTGAGAGTGGTGTTGCCGGTATTGGTGAGAGTGTTGTTGTCGGTATCGGTGAGAG	Design primers
3320892	AGGCAAA-AGGCAGA-AGGCAGA-AGGCAGA	Design primers
3334186	GAGCGGGG-GTGCGGGG-GTGCGGGG-GTGCGGGG	Design primers
3334219	TGCTGAGGTGCGGGGG-TGCTGAGGTGCGGGGG-TGCTGAGGTGCTGAGG	Design primers
3339610	GTTTGGTCATCA-TCTTGGTCATCA-TCTTGGTCATCA	Design primers
3339655	GTTTGGTCATCA-TTTTGGTCATCA-TCTTGGTCATCA	Design primers
3339740	CTGTGC-CTGTGC-CTGTAC-CTGTAC-CTGTGC-CTGTGC-CTGTGC	Design primers
3339860	CGGAGCCAGAACCGGAGGCTGTGCCAGAACCGGAGGCTGTGCCCGAACCGGAGG	Design primers
3339915	TGTGCCCGAACCGGAAGCTGTGCCCGAACCGGAGGCTGTGCCCGAACCGGAGGCTGTGCCCGAACCGGAGGCTGTGCCCGAACCGGAGGCTGTGCCCGAACCGGAGGCTGTGCCCGAACCGGAGGCTGTGCCCGAACCGGAAGT	Design primers
3340413	AGTGCTGCCACCACC-CGTGCTGCCACCACC-CGTGCTGCCGCCCCC	Design primers
3340459	GTGTTACCAGAC-GTGTTACCAGAC-GTGTTGCCAGAA	Design primers
3340496	TGCTGCCACCACCTG-TGCTGCCACCACCCG-TGCTGCCACCACCCG-TGCTGCCACCACCCG	Design primers
3341079	TTGATTATTGGTACCTGTGTTGGTTCCAGTATTGGTACCTGTGTTGGTTCCAGTATTGGTACCTGTATTGGT	Design primers
3374062	AGGGAGACAAGGAAGACAAGGGGGACAAGGGAGAGA	Design primers
3382380	TTAGAAGGTTGCAGGTTACAGGTGAGAAGGTTGCAGGTTGAAGCTTAGAAGGTTGTAGTTTATCGG	Design primers
3391721	AGGACAAGG-AGGACAAGG-GGGACAAGG	Design primers
3405302	AAGCCTACCAAGCCTACGAAGTCTACC	Design primers
3406681	AATAATTAAGTAATTAAGTAATTA	Design primers
3418736	CAGGTTGAAGGTTGGGGGTTGAAGGTTGAAGGTTGAAGGTTT	Design primers
3465390	CCCCACTCTCCCACTCCTCCACTC	Design primers
3474011	GAACAC-GGACAC-GGACAC-GGACAC	Design primers
3487748	TTCCCCA-CTCCCCA-TTCCCCA-TTCCCCA-TTCCCCA	Design primers
3492819	TGGGGAA-TAGGGAA-TAGGGAA-TGGGGAA	Design primers
3519781	ATGTAAATAAATGTAACTCAATGTAAATAT	Design primers
3535857	GGGGTGTGGGGTGTAGGGTGTGGGGTGT	Design primers
3539872	ATTGGTCATTAGTCATTAGTCATTGGTT	Design primers
3542933	GGCAGAGGGGAGAGGGCAGAGGGCAGAA	Design primers
3544616	AATCTAAAATCCAAAATCTAAAATCCAA	Design primers
3545377	CCTTCTG-CCCTCTG-CCCTCTG-CCATCTG	Design primers
3549741	CCAAAAT-CTAAAAT-CTAAAAT-CCAAACT-CTAAAAT	Design primers
3552738	CTCCCCATCTCGCCATCTCCCCATCCCCCCAT	Design primers
3585219	TAGGGGG-AATGGGG-AATGGGG-AATGGGG-AATGGGG-AATGGGG	Design primers
3618553	TGGGTAATGGATAATGGGTAATGGGTAA	Design primers
3658831	AGCAGGGGAGCTGGGGAGCTGGGG	Design primers
3667816	GCAAGAAGGCAGAA-AAAAGAAGGCAGAA-AAAAGAAGGCAGAA	Design primers
3681093	ATATATAGGAGATATAGGAGATATAGG	Design primers
3772391	CTCTTTCCATCTTTCCCTCTCTCC	Design primers
3780869	TGAGCGCTTGAGCGATTGAGCGCT	Design primers
3783946	CAACCTTC-AAACCTTC-AAACCTTC-AAACCTTC	Design primers
3791372	TTAATGACCTTGATTCCTTTGATGATATTGATTCCTTTGATGATATTGATTCCT	Design primers
3796547	CGAAACCACCAAACCACAAAACCA	Design primers
3807166	TCCCCATGACCCATTACCGATGACCCATTACCGATGACCCAT	Design primers
3816892	CACCCCAGCACCCCCGCACCTCAG	Design primers
3823269	CCCGTAGGTTCGCCTCTCGCAGGTTCGCCTTCATTAGGTTCGCCT	Design primers
3890440	GCAAGCAGGGGAGCGGGGGTGCAGGGGAGCGGGGGTGCAGGGGAGCGG	Design primers
3890489	GGTGCAGG-GGTGCAGG-GGTGCAGG-GGTGCAGG-GATGCAGG-GGTGCAGG-GGTGCAGG-GGTGCAGG	Design primers
3906622	ATCAAGTTGGCACCACTGAGGTTGGCACCAATCAAGTTGGCACCACTGAGGTTGGCACCA	Design primers
3908057	ACAACTCAGTTCGGCACCACTCAGGTTGGCACCACTCAGGTCAGC	Design primers
3920016	AGAAGGT-AGATGGC-AGATGGT-AGATGGC-AGATGGC-AGATGGC	Design primers
3934894	GGCTGAT-AGCTGAT-AGCTGAT-AGCTGAT-AGCTGAT	Design primers
3962822	GATAAGGGGACAAGGGGACAAGGG	Design primers
3962847	GACAAAGAAGACAAGGGGGACAAAGAAGACAAAGGGGACAAAGAAGACAAGGGG	Design primers
3964623	TAAGGCA-GATGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA	Design primers
3970987	GGGTGATGGGCTGGGTGACAGAGAAGGTGATGGGCTTGGTGACGTAGAAGGTGATGGGCTTGGTGATGGAGA	Design primers
3971086	TGGAGT-TGGGGT-TGGGGT-TGGGGT	Design primers
4047084	GCAAGAAGGCAGAAGGCAGGAGGCAGGAGGCAGAAGGCGGGAGGCAGAAGGCAGGAGGCAGGA	Design primers
4117165	CACGCC-CACGCC-AACGCC-AACGCC	Design primers
4140666	ACCCCCAA-TGCCCCAA-TGCTCCAA-TGCCCCAA-TGCCCCAA-TGCCCCAA	Design primers
4166421	TTCTTCC-CTCCTGC-CTCCTGC-CTTCTGC-CTCCTGC-CTCCTGC-CTTCTGC-CTCCTGC-CTCCTGC-CTCCTGC-CTCCTGC-CTTCTGC	Design primers
4174334	GTGATGG-GTGATGG-GTAATGG-GTAATGG-GTAATGG	Design primers
4198968	AGCAGGGGAGCGGGGGAGCGGGGGAGCGGGGGAGCAGGGA	Design primers
4240264	ACACCA-ACCCCA-CCTCCA-ACCCCA-ACACCA-ACCCCA-ACCCCA-ACCCCA-ACCCCA-ACACCA-ACCCCA-ACCCCA-ACACCA-ACGCCA-ACACCA-ACGCCA-ACGCCA-ACACCA	Design primers
4243452	AAGGCAGAAGGTAGAAGGTAGAAGGCAGAAGGCAGAAGGCAC	Design primers
4248793	TAGGTAA-TGGGTAA-TGGGTAA-TGGGTAA	Design primers
4250412	ACGGTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC	Design primers
4282860	CAGACGGCAGATGGCAGAGGGCAGATGG	Design primers
4320349	AACCTTCAACCCCTTAAACCTTCAACTCTTTAAACCTTCAAACGCATA	Design primers
4346624	CCTTTTGCCTTCTGCCTTCTGCCTTTTA	Design primers
4355336	GCAAAAG-GCAAAAG-GCAGAAG-GCAGAAG-GCAGAAG	Design primers
4362333	GGGTGGG-GGATGGG-GGATGGG-GGATGGG	Design primers
4405060	CATGCTTCCCTTCGGGACGCTTCCCTCCGGGACGCTTCCCTCCGG	Design primers
4415619	ACCCATTACCGATTACCCATTACCGATTACCCATT	Design primers
4455812	ATCTCCCCAGCTCCCCAGCTCCCC	Design primers
4463411	TTCTCACCTTGACCCTTCTAACCTTAAGCCTTCTCACTTTAAACC	Design primers
4508915	ATTACCC-ATTACCC-GTTACCC-ATTAGCC	Design primers
4560404	GGAGCGGG-GGAGCGGG-GGAGCAGG	Design primers
4563377	GGAGTCAGGAGCCAGGAGTGAGGAATCA	Design primers
4598003	ATGACGATGACAACGACCATGACAACGACCATGACAACGACCATGACAAGGATGATGACA	Design primers
4604863	TGAAGTA-TGAAGTA-TGAAGAA-TTAAGTA-TAAAGTA	Design primers
4608334	CAATTAC-CAATTAC-CCATTAC-CCATTAC	Design primers
4625811	GGGCTGATTTGAGTAAAGCTGATTTAAGTAGGGCTGATTTAAGTCAGGCTGACTTGAGTG	Design primers
4649193	AGTACCCAGTCCGAATCC-TTCACCCAGTCCGAATCC-TTCACCCAGTCCGAATCC-TTCACCCAGTCCGAATCC-TTCACCCAGTCCGAATCC	Design primers
4672289	AACGGGAGTCGGTAAAACAGCAGGTGGATTCGGTAAAACAGCAGGTGGAGTTGGTAAAACAGC	Design primers
4677046	ACCAAG-CCCAAG-CCCAAG-CCCAAG-CCCAAG	Design primers
4677285	CCAGCC-CCAGCC-ACAGCC-CCAGCC	Design primers
4678157	CTCAAAACAGCTCGATTCAAGACAGCTCGATTCAGGACAGCTCGA	Design primers
4683949	AGAAGGCAGAAGTCAGGAGGCAGAAGGCAGAAGGG	Design primers
4712596	ATTGGTGATTGGTAATCGGTAATTGGTAATTGGTCATTGGTC	Design primers
4717127	TGCTCCCC-CACTCCCC-CACTCCCC-CACTCCCC-CACTCCCC-CTCTCCCC	Design primers
4719628	GGGGTGTGCGGTGTAGGGTGTGGGGTGT	Design primers
4745215	CAAGGCA-GAGGGTA-TAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA	Design primers
4809609	AATCCCAAATTCCAAATCCCAAATTCCAAATCCGA	Design primers
4811816	ATGGGGAGATGAGGAGATGGGAAG	Design primers
4835510	TTACCA-TTGCCA-TTGCCA-TTGCCA	Design primers
4839994	CC-CC-GC-AC-CC-CC-GC-AC-CC-CC-GC-TC	Design primers
4842757	CTTCTGCCTTCTGTCCTCTGCCTTCTGC	Design primers
4844871	AATCCAA-AATCCAA-TATCCAA-AATCGAA	Design primers
4853308	TCCTCTGC-TCCCCTGC-TCCCCTGC-TCCCCTGC	Design primers
4853341	CCCCCGCT-CCCCCGCT-CCCCCGCG-CCCCTGCT	Design primers
4887206	TTGAACT-TTCAACT-TTCAACT-TTCAACT	Design primers
4903635	TCCTTGTTGTAAGCCTTGCTGTAAACCTTGTTGTAAGCCTTGCTGTAAACCTTGTTGTAA	Design primers
4966847	TCAAAATTCAAAAATAAAAATCCAAAAT	Design primers
4968773	ATACTTCATACTTTATCCTTCATACCTC	Design primers
4983272	CCAATTC-CCCATTC-CCCATTC-CCCATTC-CCCATTC	Design primers
4995853	TCACAAGAGTCAACTCAAAAATCACAAGACCCAGCCCAAAAATCACAAGAACCAACTCAAACGTCCCAAGAGTCAACTCAAAAATCACAAAATTCAACTCAAAACTTGCAAGAGTCAACTCAAACGTCACAAGACTCCACTCAAGAG	Design primers
5020825	ATGATGATGGTCATGGTCATGGTCATGGTCATGGTCATGATGATGATG	Design primers
5020894	ATGCTCATGGTCGTGATGCTCATGGTCATGATGCTCATGAGCCTG	Design primers
5052969	GTTTAACCTAATAACCTTCAACCTGATAACCTTCAACCTGATAAC	Design primers
5084536	AAGGCAGAAGGCAAAGGGCAGAAGGCAG	Design primers
5084602	AAAGGCAAAGGGCAAAAGGCAAAAGGCA	Design primers
5084656	CTGCCTCCTACCTCCTGCCTCCTGCCTT	Design primers
5085717	GGCAGAGGGCAAAGGGCAGAAGGCAGAA	Design primers
5085896	CCTTCTG-CCTTCTG-CCTCCTG-CCTTCTG-CCTTCTT	Design primers
5085989	CCTTCTGCCCTCTGCCTCCTGCCTTCTA	Design primers
5105521	ATTCATTGGGGTAGCTGCCGAATTCATCGGCGTAGAAGCCGAATTCATCGGCGTAGAAGCCGAATTCATCGGGGTAGCAGCAGA	Design primers
5106859	TTAGCTGATGGACTGGCTGATGGATTGGCTGCCGGACTAGCTGATGGATTGGCTGATGGATTGGCTGCCGGA	Design primers
5106934	GCTGATGTACTGGCTACCGGACTGGCTACCGGACTGGCTACCGGACTGGCTGATGGACTGGCTGATGGACTG	Design primers
5107011	CGGA-CTGC-CTGA-TGGA-CTGG-CTGA-CTGA-CTGA-CTGA	Design primers
5111071	ATGGCAG-AAGGCAG-AAGGCAG-AAGGCAG-AAGGCAG	Design primers
5111107	AGGCAGG-AGGCAGG-AGGCAGG-AGGCAGG-AGGCAGG	Design primers
5120167	AG-CG-GG-GG-AG-CT-GG-GG-AG-CG-GG-GG-AG-CG-GG-GG	Design primers
5165744	TTCTTCTTCTCCTTTTTCTTTTTC	Design primers
5167241	GGGGTGCTGAGGTGCTGAGGTGCT	Design primers
5174563	TCTAGAGCTTGAGCG-CCGAGAACTTGAGCG-CCGAGAACTTGAGCG-CCGAGAACTTGAGCG	Design primers
5255577	AAGGTTGAAGGTTTAAGATTGAAGGTTG	Design primers
5303934	AGCAGGGGAGCGGGGGAGCAGGGG	Design primers
5323172	CCTTCAACCCTTTAACCCTTTAAC	Design primers
5400250	TCAACCT-TTAACCT-TCAACCT-TCAACTT-TCAACCT	Design primers
5401086	TCTTGCC-TCCTGCC-TCCTGCC-TCCTGCC	Design primers
5407299	AGAAGGC-AGAAGGC-AGGAGGC-ACAAGGC-ACAAGGC	Design primers
5432757	CTCTCCGATTTCTGCCCGATTTCTGCCCGATTT	Design primers
5436587	TCAGAAG-TCAAAAG-TCAAAAG-TCAAAAG-TCAAAAG	Design primers
5442253	CTCACCGATTTCTACCCGATTTCTACCCGATTT	Design primers
5465621	GCCGCTGGAGCCGCTGTAGCTGCTGGAGCTGCTGGA	Design primers
5471147	CTGCCTTCTGCCTCCTGACTTCTGCCTT	Design primers
5472625	TGGGGGATCATCTGGTGGCGATGGTGGTTCATCCGGTGGTGATGGTGGTTCGTCCGGTGGCGA	Design primers
5474078	CTTCTGC-CTTCTGC-CTCCTGC-CTTCTGC-CTTCTGC	Design primers
5481398	AATGGGTAATGAGTAATGGGTAATGGGTAATGGAT	Design primers
5526043	GCAAAAGGCAGAAGGCACAAGGCACAAG	Design primers
5583754	TAGCTCCC-CAGCTCCC-CAGCTCCC	Design primers
5588103	ATACCGATT-AGACCGATT-AGACCGATT-AGACCGATT-AGACCGATT	Design primers
5599009	GGCTGCTGGGGTGCTGGGGTGCTG	Design primers
5604327	AGAAGGC-AGGAGGC-AGGAGGC-AGGAGGC-AGAAGGC	Design primers
5604762	AGGCTAGGCCATGCTAGGCTATGCT	Design primers
5653048	CTAACCTTCCAACCTTCTAACCTA	Design primers
5689302	AGAAGGC-AGAAGGC-AGGAGGC-AGAAGGC-AGAAGGA	Design primers
5697811	ACCTTTT-TCCTTTT-TCCTTTT-TCCTTTT	Design primers
5712978	ACTCTGTG-CCTCTGTG-CCTCTGTG	Design primers
5724381	GGGGGAGCGGGGGAGATGGGGAGCTGGGGAGC	Design primers
5840416	AAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA	Design primers
5913498	GCAGGGGA-GCAAGGGA-GCAAGGGA-ACAGGGGA	Design primers
5914972	CTCCCCAGCTCCTCAGCTCCCCCG	Design primers
5915592	GGTGGTGATGGTGGTGCTAGTGGT	Design primers
5940567	TGGGGTGCGGGGGTGCTGAGGTGCTGAGGTGCTGAGGTGCTGAGGTGCGGGGGTGCTGAGGTGCGGGGGTGC	Design primers
5954028	AGGGTGCG-GGGGTGCG-GGGGTGCG	Design primers
5963866	GCAGGTT-ACAGGTT-ACAGGTT-ACAGGTT	Design primers
5967106	TGGTGAGGGACTCGGTGACGGTGAGGGACTGGGGGATGGTGAAGGACTGGGGGA	Design primers
6002476	GATTTTGGATGTTGGATGTTGGATTTTT	Design primers
6027631	TCTGCCCTTTGCCCTCTGCCTTCTGCCT	Design primers
6036023	CATTCAACATTTAACGTTCAACGTTCAA	Design primers
6037266	TAGGTAATGGGTAATTGGTAATGGGTAA	Design primers
6038186	CTGTGCCTGTACCTGTCCCTGTAC	Design primers
6038287	CCTGAACCCGAACCCGAACCTGCA	Design primers
6079100	GAGGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA	Design primers
6084491	TTTCTTACCGATTTCTACCCGATTTCTTGCCTA	Design primers
6131597	CTAAAAT-CCAAAAT-CCAAAAT-CCAAAAT	Design primers
6146472	AGCAGGGGAGCGGGGGAGCGGGGGAGCAGGGG	Design primers
6185546	AATGATC-AATGATG-AATGACC-AATGACC-GATGATC	Design primers
6197041	GCAAAAG-GCAGAAG-GCAGAAG-GCAGAAG	Design primers
6221681	AG-TG-GG-GG-AG-CT-GG-GG-CG-TT-GG-GG-AG-CA-GG-GG-AG-CG-GG-GG-AG-CG-GG-GG	Design primers
6224115	ATCCAAAATCCCAAATCTAAAATCCACA	Design primers
6303231	ATACCCATG-CCGCCCATG-CCGCCCATG-CCGCCCATG-CCGCCCATG-CCGCCCATG	Design primers
6310962	TCTCCCAA-GCTCCCCA-GCTCCCCA-GCTCCTCA-GCTCCCAA-GCTCCTCA	Design primers
6335675	TGAGGTTGGAGT-GGGAGTTGGCGT-TGGAGTTGGCGT-TGGAGTTGGCGT-TGGAGTTGGCGT-TGGAGTTGGCGT-TGGAGTTGGCGT-TGGAGTTGGCGT	Design primers
6357004	TCCCTTC-TGCCTTC-TGCCTTC-TGCCTTC	Design primers
6357865	ACGCCAAGTCCAACTCCTACACTAAGCCCAACTCCTACACCAAGCCCAACTCCTACACCAAGCCCAACTCCTACACCAAGCCCAACTCCCACGCCAAGTCCGACACCA	Design primers
6360152	TGATCTGACTGGCACAGATTTGACTGGCGCTGATCTGGCTGGGGC	Design primers
6389479	AGCAGGGGAGCGGGGGAGCAGGGGAGCAGGGGAGCAGGGG	Design primers
6397836	AGCAGGGGAGCGGGGGAGCAGGGG	Design primers
6428375	AGCTCCCCCGCTCCCCAGCTCCCT	Design primers
6454356	TTTTTTT-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC-CTTCTGC	Design primers
6458763	AGGGAGACAAGGAAGACAAGGAAGACA	Design primers
6466829	TTGGTAA-TGGGTAA-TGGGTAA-TGGGTAA	Design primers
6491062	CAGGAGT-CAGGACT-CAGGACT-CAGGAGT	Design primers
6500581	TCATCAGCATCATCATCATCATCT	Design primers
6520541	GAGGGCAAGGAGGACAAGGAGGACAAG	Design primers
6532485	AAGAGAAAAGACGAGAAGAGAAGAC	Design primers
6541034	AATGGGT-AATGGGT-AATCGGT-AATGGGT-AATGGGG	Design primers
6556707	AACTTTCAACCTTCAACTTTCAACCTTC	Design primers
6558735	GTCGATGTCGTCGATTTCGTCAATGTC	Design primers
6576903	AACCCTAATCCTAACTCTAACCTTAACCCTAACCTTAACCAT	Design primers
6619904	ATAGCAG-AAGGCAG-AAGGCAG-AAGGCAG-AAGGCAG-AAGGCAG-AAGGCAG-AAGGCAG	Design primers
6632894	TTTATC-TTTATC-TTTGTC-TTTGTC	Design primers
6659683	TCCGATT-ACCGATT-ACCGATT-ACCGATT	Design primers
6689448	AGGGGGACAAGGAGGACAAGGGGGACAAGGGGGACAAGGGGGAGA	Design primers
6764084	TCTCTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC-TGCCTTC	Design primers
6787193	GTAATTGGTAATGGGTAATTTGTAATTC	Design primers
6801532	AATATAG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG-CAGAAGG	Design primers
6818038	AATAAC-AATAAC-AACAAC-AATAAT-AATAGC	Design primers
6822768	ATCTATT-ACCTATT-ACCTATT-ACCTATT	Design primers
6824579	CTGCCT-GTGCCT-GTGCCT-GTGCCT	Design primers
6824608	CGTGCC-TGTGCC-CGTGCC-TGTGCC-TGTGCC	Design primers
6854738	GCAGGGGAGCTGGGGAGTTGGGGAGCGGGGGAGCTGGGGAGCTGGGGAGCTGGGGAGCGGGGGA	Design primers
6882718	GTTAGCACCGCTCAAATTCGCCCCGCTCAAGTTAGCATTACTCAA	Design primers
6886276	GGGGTGTGGGGTGTAGGGTGTGGGGTGT	Design primers
6897450	CGGCTTTGGCTTCCGCTTCGGCTT	Design primers
6905890	CAATGCCGACCTCAGTGGTGCCGACCTCAGCGGTGCCGACCTCATCAATGCCAATCTCAG	Design primers
6906050	CTCAGTGGTGCCAACCTCAGCGGTGCCAACCTCAGATATGCCAACCTCAGTGGTGCCAACCTCAGTAGTGCCAACCTCAGTGGTGCCAAC	Design primers
6944236	GACATTA-CCCATTA-CCCATTA-CCCATTA-CCCATTA-CCCATTA	Design primers
6961361	GGCAGAGGACAGAGGGCAGAGGGCAGAA	Design primers
7003371	GTGCCCT-ATGCCTT-ATGCCTT-ATGCCTT-ATGCCTT-ATGCCTT	Design primers
7022283	TTTCTACCCTCTGCCTTCTGCCTTCTGCCTTCTGCCTTCTACCCTCTACCTTCTGCCTTCTAC	Design primers
7028320	AGCAGAA-GGCAGAA-GGCAGAA-GGCAGAA-GGCAGAA	Design primers
7084379	GCATTAC-CCATTAC-CCATTAC-CCATTAC	Design primers
7119402	CCACTCCCAACTCCCGACTCCCGACTCC	Design primers
7126008	CTCCCCCGCTCCCCTGCTCCCCTGCTCCCCCG	Design primers
7126222	CGTTCCACTCAAGTC-TGCGCCACTCAAGTC-TGCGCCACTCAAGTC-TGCGCCACTCAAGTC-TGCGCCACTCAAGTC	Design primers
7147123	GAAAAAGACAAAGAAAAAGAAAAC	Design primers
7165077	GGGGAT-GGGGAT-GGTGAT-GGTGAT	Design primers
7202555	GGATTTTGAATTTTAGATTTTGGATTTT	Design primers
7230250	CAGAGGCAGAAGCAGAGCCAGAGC	Design primers
7259015	TCTTCAC-TTCTGCC-TTCTGCC-TTCTGCC-TTCTGCC-TTCTGCC-TTCTGCC-TTCTGCC-TTCTGCC-TTCTGCC-TTCTGCC-TTCTGCC	Design primers
7300708	AGAAGGC-AGAAGGC-AGGAGGC-AGAAGGC-AGAAGGT	Design primers
7304506	CATCACATCGCATAAAATCAAATCA	Design primers
7344830	GCCATTA-CCTATTA-CCTATTA-CCTATTA-CCTATTA-CCTATTA	Design primers
7345247	GCGTCCAGCAAATTCGCCTCCAGCAGATTCGCGCCCGACAAATTC	Design primers
7345453	ATCAGCGCCACTCAGATTCGCGCCACTCAGATTTGCCCCACTCAG	Design primers
7356852	CGCACCACTTAAGTCCGCCGCACATAAGTCGGCACCACTCAAATC	Design primers
7362401	TTTCTCAGCTCGCTGGTGTTCTTGTTCAGCTCGCTGGCGCTCTTGTTCAGCTCGCTGGCGCTC	Design primers
7371770	TTGAGTAGAGTTGAATTGAGTTAAG	Design primers
7388944	CAACTTTTAACCTT-CAACTTTTAACCTT-CAACTGTTAACTTT-CAATCTTTAACCTT	Design primers
7394705	ACTTCAT-ACTTCAT-ACTTTAT-ATTTCAT	Design primers
7421572	AGGGAGACA-AGGAAGACA-AGGGGGACA-AGGGGGACA-AGGGGGACA	Design primers
7431282	CATTACC-CATTACC-AATTACC-CATTACC-AATTACC	Design primers
7440157	ACCGCTTTTAACCCGTTTTAACGGGTTTTA	Design primers
7441250	CACTTCAACGAATATCCCATCAACGGATATCCCATCAACGAATATCCCATCAACGGATAT	Design primers
7441311	CCATCAACGGATGTC-CCATCAACGGATGTT-CCATCAACGGATGTT-CCATCAACAGATGTT-CCATCAACGGATGTT-CCATCAACGGATGTC-CCTTCAACAGATGTT	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

5522

CTTCATA-CTTCATA-CTTCCTA-CTTCATA