Microsatellites /Tandem Repeats database

Genome: Synechococcus sp. PCC 7502

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
235626GTTTAAGGAGTTGTTTGAGGAGTTGTTTGAGGAGTTDesign primers
449325GTCCTA-CACCTA-CACCTA-CACCTA-CACCTA-CACCTA-CACCTA-CACCTA-CACCTA-CACCTA-CACCTA-CACCTADesign primers
452347TCTAAAAATTTCTAAGAATTTCTAAAAATADesign primers
730086AAATCTCATG-TAATCTCATG-TAATCTCATGDesign primers
894864CAGGAAATG-CAGGAAATG-CAGGAAATGDesign primers
908221GGTTCCACTTAGATCGGCTCCACTTAGATCGGCTCCACTTAGATCDesign primers
912574TTAATTTTTGATCTTGATTTTTGATCTTGATTTTTGATCDesign primers
1376075GCTAACTTATTCGCTAACTTATTGGTTAACTTATTCDesign primers
1446182AATTTACAAAACAATTTACAAAAGAATTTACGAAACDesign primers
2291081ACTGATATACACCTGATATACAACAGATATACADesign primers
2315774TATAAATTCAAGCTAGAAATTCAAGCTAGAAATTCAAGCDesign primers
2570267CTAAATTCCGACTAAATTCTGACTAAATTCGGADesign primers

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