Microsatellites /Tandem Repeats database

Genome: Pleurocapsa sp. PCC 7327

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
41730TTGCAA-TTGCAA-TTGCAA-TTGCAADesign primers
98137CCCAGTCT-CCCAGTCT-CCCAGTCT-CCCAGTCT-CCCAGTCTDesign primers
499742TTTGTCA-TTTGTCA-TTTGTCA-TTTGTCADesign primers
575902GGCAGAGAA-GGCAGAGAA-GGCAGAGAADesign primers
621564CCTCTGCG-CCTCTGCG-CCTCTGCGDesign primers
695481TTATCAG-TTATCAG-TTATCAG-TTATCAGDesign primers
1290565AATGATTGGCGAGCGGG-AATGATTGGCGAGCGGG-AATGATTGGCGAGCGGG-AATGATTGGCGAGCGGG-AATGATTGGCGAGCGGG-AATGATTGGCGAGCGGG-AATGATTGGCGAGCGGG-AATGATTGGCGAGCGGGDesign primers
1601353AGTTCAA-AGTTCAA-AGTTCAA-AGTTCAADesign primers
1649836AATTACG-AATTACG-AATTACG-AATTACGDesign primers
1904514CCGCCTTCA-CCGCCTTCA-CCGCCTTCADesign primers
1966391AATCCCCCC-AATCCCCCC-AATCCCCCCDesign primers
2412701AATTATG-AATTATG-AATTATG-AATTATG-AATTATGDesign primers
2417680ATGAATG-ATGAATG-ATGAATG-ATGAATG-ATGAATGDesign primers
2460924TAACTAC-TAACTAC-TAACTAC-TAACTAC-TAACTACDesign primers
2893897TAACAAC-TAACAAC-TAACAAC-TAACAACDesign primers
2963602GTGTG-GTGTG-GTGTG-GTGTG-GTGTG-GTGTGDesign primers
2963633TGCAATAGGTTGTGG-TGCAATAGGTTGTGG-TGCAATAGGTTGTGGDesign primers
2999128GACTAAT-GACTAAT-GACTAAT-GACTAATDesign primers
3724623ATGACCG-ATGACCG-ATGACCG-ATGACCGDesign primers
3815389ATCTCCCT-ATCTCCCT-ATCTCCCTDesign primers
4139631TCTCCCTTA-TCTCCCTTA-TCTCCCTTA-TCTCCCTTADesign primers
4197493GGAATGATTGGCGAGCG-GGAATGATTGGCGAGCG-GGAATGATTGGCGAGCG-GGAATGATTGGCGAGCGDesign primers
4197578GGAATGATTGGCGAGCG-GGAATGATTGGCGAGCG-GGAATGATTGGCGAGCG-GGAATGATTGGCGAGCGDesign primers
4546333ATTGTTGTC-ATTGTTGTC-ATTGTTGTCDesign primers

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