This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 277855 | TTTAACGATGTACAGATTTGCA-GGTAACGATGTACAGATTTGCA-GGTAACGATGTACAGATTTGCA-GGTAACGATGTACAGATTTGCA | Design primers |
| 280152 | TTTAACGATGTACAGATTTGCA-GGTAACGATGTACAGATTTGCA-GGTAACGATGTACAGATTTGCA-GGTAACGATGTACAGATTTGCA | Design primers |
| 282449 | TTTAACGATGTACAGATTTGCA-GGTAACGATGTACAGATTTGCA-GGTAACGATGTACAGATTTGCA-GGTAACGATGTACAGATTTGCA | Design primers |
| 1661115 | ATAAGCA-AAAAGCA-AAAAGCA-AAAAGCA-AAAAGCA-AAAAGCA | Design primers |
| 1716655 | TGGTTATTTCCTTGTTATTTCCTTGTTATTTCC | Design primers |
| 2000879 | CAACAG-CAACAG-CAACAG-CAACAG | Design primers |
| 2584235 | TAGCTCCGTAGA-TAACTCCGTAGA-TAACTCCGTAGA-TAACTCCGTAGA | Design primers |
| 2740551 | TTGTGTCGCCGCCGGTATCACCAC-CTGTGTCGCCGCCGGTATCACCAC-CTGTGTCGCCGCCGGTATCGCCAC | Design primers |
| 3085886 | CTTTTT-CTTTTT-CTTTTT-CTTTTT | Design primers |
| 3228314 | AGGAAATAGCGCAGCGCATATAGGTAATAGCACAGCGCATATAGGTAATAGCACAGCGCATAT | Design primers |
| 3523350 | CTTAGCTACTTAACTA-CTTAGCTACTTAACTA-CTTAGCTACTTAGCTA | Design primers |
| 3523399 | TTTGCTAC-TTTGCTAC-TTTGCTAC | Design primers |
| 3834134 | ATTTCG-GGTTCG-GGTTCG-GGTTCG-GGTTCG-GGTTCG-GGTTCG-GGTTCG-GGTTCG-GGTTCG-GGTTCG-GGTTCG | Design primers |
| 4251807 | GAGCAT-GAGCAT-GAGCAT-GAGCAT-GAGCAT | Design primers |
| 4311432 | ACGAACATG-ACGAGCATG-ACGAGCATG-ACGAGCATG-ACGAGCATG-ACGAGCATG | Design primers |
| 4423899 | TCTTCGC-TATTCGC-TATTCGC-TATTCGC-TATTCGC-TATTCGC-TATTCGC-TATTCGC | Design primers |
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