Microsatellites /Tandem Repeats database

Genome: Leuconostoc carnosum JB16

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
30499GAGAAAGAGTAAGGGAAAGAAAAADesign primers
159343AGAGAAAGAGTAAGGGAAAGAAAADesign primers
437830AAAAAGTCAATAAATGTCAACAAAAGTCAADesign primers
460682ACAATC-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGADesign primers
498547TATTAATAATTATCAATCATTATCAATCATDesign primers
542249ATTGATAATGATATTGTTATTGATDesign primers
667269CCAGCAACTAAACCAGCGGCTAAAACAGCAACTACADesign primers
763217AAACCAGCAAGT-AAACCAGCAAGT-AAACCAGAAATTDesign primers
970078CCAATAAACTAATAAACTAATAAADesign primers
1060691CAAAGA-AAAAGA-AAAAGA-AAAAGADesign primers
1450358TCTCTTTCTCTCACTCTTTTTCTTTCCCTTACTCTTDesign primers
1631422ATAATTATGATTGTAATTATAATTDesign primers

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