Microsatellites /Tandem Repeats database

Genome: Listeria monocytogenes SLCC2378

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
358522GTTTTGTTGCTTGTTTTGTTGCTGTTTTTGTTGCTTDesign primers
675956ACACCAAAAGATACACCAAAAAATACACCAAAAGATDesign primers
1150958CCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGADesign primers
1850493TCGGCATCAGCATCGGCATCGGCATCCGCATCAGCADesign primers
1851135TCGGCGTCAGCATCCGCA-TCGGCGTCAGCATCCGCA-TCGGCGTCAGCATCAGCADesign primers
1851190CAGCAT-CAGCAT-CAGCAT-CAGCATDesign primers
1851240GCATCGGCATCAGCATCCGCATCAGCATCCGCATCADesign primers
1851303TCCGCATCAGCGTCCGCATCAGCATCAGCATCAGCGTCCGCATCAGCGDesign primers
1851352CGGCATCCGCATCAGCATCCGCATCGGCGTCCGCATDesign primers
1851531TCAGCATCCGCATCGGCATCCGCATCAGCATCCGCADesign primers
1851666GCATCCGCATCCGCATCAGCATCCGCATCCGCATCADesign primers
1851840GCGTCAGCATCCGCATCAGCGTCGGCATCCGCATCAGCGTCAGCATCCGCATCCDesign primers
2443767ATTTTGTTGAATCTA-ATTTTGTTGAATCTA-GTTTTGTTGAATCTADesign primers

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