Microsatellites /Tandem Repeats database

Genome: Bacillus thuringiensis HD-771

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
179692GGTCCAGTA-GGTCCAGTA-GGTCCAGTADesign primers
763347TTTTTA-TTTTTA-TTTTTA-TTTTTADesign primers
927310TTTTTCAACAC-TTTTTCAACAC-TTTTTCAACACDesign primers
1559267CCTGTTGCTCCTGTTGGG-CCTGTTGCTCCTGTTGGG-CCTGTTGCTCCTGTTGGGDesign primers
2127325TCAAGGCAT-TCAAGGCAT-TCAAGGCATDesign primers
2127659CCTACTGGA-CCTACTGGA-CCTACTGGADesign primers
2168255CCTGTTGGA-CCTGTTGGA-CCTGTTGGADesign primers
2190258ATGGTTCT-ATGGTTCT-ATGGTTCTDesign primers
2857596TGTTCTTGT-TGTTCTTGT-TGTTCTTGT-TGTTCTTGT-TGTTCTTGT-TGTTCTTGT-TGTTCTTGT-TGTTCTTGT-TGTTCTTGT-TGTTCTTGTDesign primers
3135309TTCTTT-TTCTTT-TTCTTT-TTCTTTDesign primers
3442527AGCTGGTTT-AGCTGGTTT-AGCTGGTTTDesign primers
3694464GGCTCTGGTGGCAAT-GGCTCTGGTGGCAAT-GGCTCTGGTGGCAAT-GGCTCTGGTGGCAAT-GGCTCTGGTGGCAAT-GGCTCTGGTGGCAATDesign primers
4160788CAGCACCTACTG-CAGCACCTACTG-CAGCACCTACTGDesign primers
4751343GATACAGAGAAA-GATACAGAGAAA-GATACAGAGAAADesign primers
4852417AATGCCTTTTTC-AATGCCTTTTTC-AATGCCTTTTTC-AATGCCTTTTTCDesign primers
4907265AAAAAGAT-AAAAAGAT-AAAAAGATDesign primers
4934100CAAGGCCAT-CAAGGCCAT-CAAGGCCAT-CAAGGCCAT-CAAGGCCAT-CAAGGCCATDesign primers
4934157GGCCACCAA-GGCCACCAA-GGCCACCAADesign primers
4934185GTCACCAAG-GTCACCAAG-GTCACCAAG-GTCACCAAGDesign primers
4934322CAACAGCAC-CAACAGCAC-CAACAGCACDesign primers
5117004GGAAACGACAACCAAGGC-GGAAACGACAACCAAGGC-GGAAACGACAACCAAGGCDesign primers
5117083ACAACCAAGGTGGAAACA-ACAACCAAGGTGGAAACA-ACAACCAAGGTGGAAACADesign primers

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