Microsatellites /Tandem Repeats database

Genome: Marinobacter sp. BSs20148

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
166572CAAGGGCGAAGGAGAAGCAGAAGGCAAGGCCGAAGGAGAAGGAGAAGGCAAGGCCGAAGGAGAAGGAGAAGGDesign primers
471603CGCAAC-TGCAAC-TGCAAC-TGCAAC-TGCAAC-TGCAAC-TGCAAC-TGCAACDesign primers
902343AGAGTTGCCTTAAAAGTTGCCTTAAAAGTTGCCTTADesign primers
943108ATACGATA-ATACGATA-ATACGATA-ATACGATADesign primers
1029117CGCCCACCA-CGCCCACCA-CGCCCACCADesign primers
1058423GCCGCA-GACGCA-GACGCA-GACGCA-GACGCA-GACGCADesign primers
1069064TACTTTCAAGCTACTTTCAAACTACTTTTAAGCTACTTTCAAACDesign primers
1126804TTTGAT-TTTGAT-TTTGAT-TTTGATDesign primers
1335952TGGACGA-TGGACGA-TGGACGA-TGGACGADesign primers
1365788TAAGGCT-TAAGGCT-TAAGGCT-TAAGGCTDesign primers
1365825AGGAAT-AGGAAT-AGGAAT-AGGAAT-AGGAATDesign primers
1420274CTCCTTCCAA-CTCCTTCCAG-CTCCTCCCAA-CTCCTCCCAA-CTCCTCCCAADesign primers
1558604TACAAATCCT-GACAAATCCT-GACAAATCCTDesign primers
1775247TTGCTAG-TTGCTAG-TTGCTAG-TTGCTAGDesign primers
2462959GAAGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTCDesign primers
2533368ACCGAA-ACCGAA-ACCGAA-ACCGAADesign primers
2616730CAGCAGCGGCCAGAACAGCAGCGCCCAGAACAGCAGCGCCCAGAADesign primers
2745016ACTGGTT-ACTGGTT-ACTGGTT-ACTGGTTDesign primers
2969733TGATGCCC-TGATGCCC-TGATGCCC-TGATGCCC-TGATGCCCDesign primers
3070894GAGGAT-GGGGAT-GGGGAT-GGGGAT-GGGGAT-GGGGATDesign primers
3093459AGTTACTGT-AGTTACTGT-AGTTACTGT-AGTTACTGT-AGTTACTGTDesign primers
3148688AACAGGTT-GACAGGTT-GACAGGTT-GACAGGTT-GACAGGTT-GACAGGTTDesign primers
3149408CGATAAG-CGATAAG-CGATAAG-CGATAAGDesign primers
3380338GGTCAGGC-GTTCAGGC-GTTCAGGC-GTTCAGGC-GTTCAGGC-GTTCAGGCDesign primers
3482021ATGCACTG-ATGCACTG-ATGCACTGDesign primers
3911969TTCGGGGTAACCGGCTTCGGAGTAACCGGCTTCGGAGTAACCGGCDesign primers
3953175CTGGTCTAGT-CTGGTCTAGT-CTGGTCTGGT-CTGGTCTGGTDesign primers

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