Microsatellites /Tandem Repeats database

Genome: Marinobacter sp. BSs20148

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
471604GCAACT-GCAACT-GCAACT-GCAACT-GCAACT-GCAACT-GCAACT-GCAACTDesign primers
902345AGTTGCCTTAAA-AGTTGCCTTAAA-AGTTGCCTTAAADesign primers
943108ATACGATA-ATACGATA-ATACGATA-ATACGATADesign primers
1029117CGCCCACCA-CGCCCACCA-CGCCCACCADesign primers
1058425CGCAGA-CGCAGA-CGCAGA-CGCAGA-CGCAGA-CGCAGADesign primers
1126804TTTGAT-TTTGAT-TTTGAT-TTTGATDesign primers
1335952TGGACGA-TGGACGA-TGGACGA-TGGACGADesign primers
1365788TAAGGCT-TAAGGCT-TAAGGCT-TAAGGCTDesign primers
1365825AGGAAT-AGGAAT-AGGAAT-AGGAAT-AGGAATDesign primers
1420294CTCCTCCCAA-CTCCTCCCAA-CTCCTCCCAADesign primers
1558605ACAAATCCTG-ACAAATCCTG-ACAAATCCTGDesign primers
1775247TTGCTAG-TTGCTAG-TTGCTAG-TTGCTAGDesign primers
2462961AGTCGG-AGTCGG-AGTCGG-AGTCGG-AGTCGG-AGTCGGDesign primers
2533368ACCGAA-ACCGAA-ACCGAA-ACCGAADesign primers
2745016ACTGGTT-ACTGGTT-ACTGGTT-ACTGGTTDesign primers
2969733TGATGCCC-TGATGCCC-TGATGCCC-TGATGCCC-TGATGCCCDesign primers
3070896GGATGG-GGATGG-GGATGG-GGATGG-GGATGGDesign primers
3093459AGTTACTGT-AGTTACTGT-AGTTACTGT-AGTTACTGT-AGTTACTGTDesign primers
3148689ACAGGTTG-ACAGGTTG-ACAGGTTG-ACAGGTTG-ACAGGTTGDesign primers
3149408CGATAAG-CGATAAG-CGATAAG-CGATAAGDesign primers
3380340TCAGGCGT-TCAGGCGT-TCAGGCGT-TCAGGCGT-TCAGGCGT-TCAGGCGTDesign primers
3482021ATGCACTG-ATGCACTG-ATGCACTGDesign primers

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