Microsatellites /Tandem Repeats database

Genome: Cronobacter sakazakii ES15

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
497955GGTATGGGCGGCATGGGCGGCATGGGCDesign primers
517860GCC-GCC-GCC-GCC-ACC-GCC-GCC-ACCDesign primers
702435GCGGCGCGTCGAGGCGCAGCGCGGGDesign primers
812908AACACAAC-AACACAAC-ATCACAACDesign primers
848765CCCCTATAGTCCCCTCTGGTCCCCTGTTGTDesign primers
894935CACCCGCCGTTAAAAATA-CACCCGCCGTTAAAAATA-CACCCGCCATTAAAACAADesign primers
952866CAACAACGGCGGCGGCGATAACGGCGGTGGCGACAATGGTGGCGGTGATAACGGCGGCGGCGACAACGGCGGTGGDesign primers
966653CTGGTGGCGATCCCGCTTATCGCGATCCCGCTGATTGTGATCCCGDesign primers
1021700GCTTCGGCTTCCGCTGCGGCTTCCDesign primers
1136160CGCACCAGCAGCGCGCTCGCCAGCAGCGCCAGCACAAGCAGCGGGDesign primers
1147944TGGTGGTGGTCGTGGTGCTGGCGGDesign primers
1207094ACGCTGACGCTAATGCTGACGCTGDesign primers
1326185GGTGGCGGTGACGGTCGCGGTGCCDesign primers
1377134GGCTTTGCACCGGTTTGCACAGCTTTGCATDesign primers
1379268TTTTTACCATCATTTTGCCATCATTTTACCATADesign primers
1595305TGCGCGTTCTGACCATTGGCGTTCTGACCGTTGGCGTTCTGGCCADesign primers
1703560TGATGATGACGATGATGATCATGADesign primers
1715529CCTGCGG-TCTGCGG-TCTGCGG-TCTGCGG-TCTGCGGDesign primers
1893123AAAGCC-GAAACC-GAAACC-GAAACC-GAAGCC-GAAACCDesign primers
2086466GCTGCTGGCGCTGCTGGTGGTGCTGGCDesign primers
2198267CGGCAACGGGAACGGCCACGGAAADesign primers
2230787TACGGCGACGGCTTCGGCTACGTCDesign primers
2335368GCTTTCAGCTTTCCGCTGTCAGCATTCADesign primers
2528639CAAGGAGCGCGCCCAGCAGCGCGCCAAACAGCGCGCDesign primers
2541348GACGGCACG-GACGGCACG-GTCGGCACGDesign primers
2651876AGCTCC-GGCTCC-GGCTCC-GGCTCCDesign primers
2852655GCTGGGGTTACGGCGGGTGCGAGGGTGACGGTTACGGCGGGTGCGAGGGTGACGGTTACGGCGGGTGCGAGGDesign primers
2886820GCGGCTTTCTCAGCGGCAGCTTTTTCCGCGGCCGCTTTTTCAGCCDesign primers
2916890GGCGCGGCTCCGCGCGGCGCGGCGTDesign primers
2980869ACATT-TCATT-ACATT-ACAAT-AAATTDesign primers
3023320TCCGTTGGCGTTTCGGTCGGCGTTTCCGTCGGTGTATCGGTTGGCGTTTCCGTTGGCGTATCGGTCGGCGTATCCGTCGGCGTATCGGTCGGCGTATCCGTCGGCGTATCCGTCGGCGTADesign primers
3023441CCGTCGGCGTATCCGTTGGCGTATCGGTTGGCGTATCCGTTGGTGTATCGGTCGGTGTATCCGTTGGTGTATCTGTCGGCGTATCCGTCGGCGTATCGGTTGGCGTATDesign primers
3164473CCGCCACCGCTGCCGCCCTCGCTGCCGCCCTCGCTGDesign primers
3181844CCTCTTCATCCTCTTCTTCCTCGTCATDesign primers
3226811CTCGCGCTGGCGCTGGCGCTCTCGDesign primers
3424786GCGCCAGCGACAGCGCAAGCCCCADesign primers
3429761GCTGCTGCTGTTGCGGCTGCTGCGDesign primers
3609207CGCGGCGCTGCGCGAAGCGGCGCAGDesign primers
3822051TCGCTTTTGCTTTCGCTTCCGCTTDesign primers
3822816CGT-CGC-CGC-CGT-CAC-CGC-CGT-CGC-CGCDesign primers
3942512CAG-CAA-CAG-CTA-CAG-CAG-CAG-CAGDesign primers
4111967GAAGAAGTAGAAAAAGAAGAAGAGDesign primers
4167418TTATCAAG-CTATCAAG-CTATCAAGDesign primers
4167443TATTAAGC-TATTAAGC-TATTAAGC-TATTAAGC-TATTAAGC-TATTAAGC-TATTAAGC-TATTAAGC-TATTAAGCDesign primers

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