Microsatellites /Tandem Repeats database

Genome: Helicobacter cinaedi PAGU611

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
2635CATTAGTTTAGATGAGTTTAGATGAGTTTADesign primers
99840TTCTACAATCTGCTAGAATCTTTTAAAATCDesign primers
105309TGTGTGAATGTGTGTATGGGTGAADesign primers
222154TTAAAAAAATTTATAAAACTTTATATAAATDesign primers
237641ATTATCAACATTACCAACATTATCAATDesign primers
291950GGATTATAAAGAATTATCAAGGATTATAAADesign primers
321775TAAAGAGATAAATAAAGAGACAACTAGCGAGATAAADesign primers
400391TTT-ATT-CAT-TTT-TAT-CCT-TTT-TTT-TTC-TTTDesign primers
534228GCATCAATATCATCAATAGCATCAACADesign primers
710830AGCACAAGCTCAAGCATAAGCACCDesign primers
732206TGCTGCTGCTGAAGCTGCTGCCGCDesign primers
949038TG-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CTDesign primers
1118016CAAAAGTTATATAAGAGTTATACAAGAATTATADesign primers
1144242ATCGCCGCC-ATCGCCGCC-ATCGCCGCCDesign primers
1167647TT-TT-TA-GA-TT-TT-TT-AC-AT-TT-TT-TA-GC-TT-TT-TT-AT-ATDesign primers
1285399TACAGAATCTTGCAAAATCTTACAGAATCTDesign primers
1339977ATATATTATAATAGAATATAATATCDesign primers
1476318AATCTACATTGAATTTATATTGAATCCACATTADesign primers
1492411AAAAAGAAAAAAGAAATAAACAAAADesign primers
1609443TCTAATACT-ACTAATACT-ACTAATACTDesign primers
1698359GTATTAGATTCTAATGTGCCAGATTCTAATCCATTAGAATCTAATDesign primers
1865533TTGTGTAGAATCTTGTATAGATTCTTGTGTGGATTCDesign primers
1891325AGGGTGTTGGACT-TGGGTGTTGGACT-TGGGCGTTGGACTDesign primers
1893698TGATAATGCTAAGGATAATAATAADesign primers
1922818ATTGT-ATTGT-ATTGC-TTTGT-ATTAT-ATTTTDesign primers
1922872TTTTA-TTTTA-TGTTA-TTATA-TTATADesign primers
1941840GCCAAAGCCTGTGAAAGCCTTACAAAGCCTDesign primers
1986116GATTTTGTGGATTCTGTGGATTCTGTGDesign primers
2031647TTTAGAATCTAGCCGTTTAGAATCTTCTCGCTTAGAATCTAGTCCDesign primers

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