This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 70458 | AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG | Design primers |
| 136654 | ATCTAAAT-ACTTAAAT-ACTTAAAT-ACTTAAAT-ACTTAAAT-ACTTAAAT-ACTTAAAT-ACTTAAAT-ACTTAAAT | Design primers |
| 137670 | ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT | Design primers |
| 232722 | GTTGTTTG-AATGTTTG-AATGTTTG-AATGTTTG-AATGTTTG-AATGTTTG-AATGTTTG-AATGTTTG-AATGTTTG-AATGTTTG-AATGTTTG-AATGTTTG | Design primers |
| 247141 | GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA | Design primers |
| 322764 | TAGTATTG-TTGTATTG-TTGTATTG-TTGTATTG-TTGTATTG-TTGTATTG-TTGTATTG-TTGTATTG | Design primers |
| 347922 | TCTTATATC-TCTTATATC-TCTTATATC-TCTTATATC-TCTTATATC | Design primers |
| 347968 | CTTATATCT-CTTATATCT-CTTATATCT-CTTATATCT-CTTATATCT-CTTATATCT-CTTATATCT | Design primers |
| 348032 | TTAGATCTC-TTATATCTC-TTATATCTC-TTATATCTC-TTATATCTC-TTATATCTC-TTATATCTC-TTATATCTC-TTATATCTC-TTATATCTC-TTATATCTC-TTATATCTC-TTATATCTC-TTATATCTC | Design primers |
| 370027 | TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC | Design primers |
| 390037 | TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC | Design primers |
| 405339 | TAAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC-CTAAATAC | Design primers |
| 415626 | GTAGAC-TTAGAC-TTAGAC-TTAGAC-TTAGAC-TTAGAC | Design primers |
| 417593 | TAGACT-TAGACT-TAGACT-TAGACT | Design primers |
| 470485 | TTATATG-TTATATG-TTATATG-TTATATG-TTATATG | Design primers |
| 507378 | TAGGTA-GAGGTA-GAGGTA-GAGGTA-GAGGTA-GAGGTA-GAGGTA-GAGGTA | Design primers |
| 529910 | TAATTAAACTT-AAATTAAACTT-AAATTAAACTT-AAATTAAACTT | Design primers |
| 541552 | ATTTTGTTAGTATCAT-ACTTTGTTAGTATCAT-ACTTTGTTAGTATCAT-ACTTTGTTAGTATCAT-ACTTTGTTAGTATCAT-ACTTTGTTAGTATCAT-ACTTTGTTAGTATCAT | Design primers |
| 602422 | AGGTTTGGTTT-TAGTTTGGTTT-TAGTTTGGTTT-TAGTTTGGTTT-TAGTTTGGTTT-TAGTTTGGTTT | Design primers |
| 602613 | TTTTAGAGTGTGTT-TATTAGAGTGTGTT-TATTAGAGTGTGTT-TATTAGAGTGTGTT-TATTAGAGTGTGTT | Design primers |
| 639053 | AAAGTTATG-AAAGTTATG-AAAGTTATG-AAAGTTATG | Design primers |
| 666358 | TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC | Design primers |
| 687020 | TATCCT-TATCCT-TATCCT-TATCCT-TATCCT | Design primers |
| 799857 | TT-TT-TT-TT-TT-TT-TT-TT-TT-TT-TT-TT-TT | Design primers |
| 958254 | AT-AT-GT-GT-AT-GT-GT-AT-GT-GT-AT-GT-GT-AT-GT-GT-AT-GT | Design primers |
| 1048344 | AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT | Design primers |
| 1081689 | AC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC | Design primers |
| 1185169 | AACTGAAT-TGCTGAAT-TGCTGAAT-TGCTGAAT-TGCTGAAT-TGCTGAAT-TGCTGAAT-TGCTGAAT-TGCTGAAT | Design primers |
| 1202324 | TTTGGCTG-AATGGCTG-AATGGCTG-AATGGCTG-AATGGCTG-AATGGCTG-AATGGCTG-AATGGCTG-AATGGCTG | Design primers |
| 1248338 | TACAAATTCTTTATTTTCTTC-ATCAAATTCTTTATTTTCTTC-ATCAAATTCTTTATTTTCTTC | Design primers |
| 1294998 | TGCATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG-TAAATG | Design primers |
| 1323531 | GTCCAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT-TTACAT | Design primers |
| 1445101 | ATTATT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT-ATTTGT | Design primers |
| 1503182 | AACTTCTTTTTTAGC-TACTTCTTTTTTAGC-TACTTCTTTTTTAGC-TACTTCTTTTTTAGC-TACTTCTTTTTTAGC-TACTTCTTTTTTAGC-TACTTCTTTTTTAGC-TACTTCTTTTTTAGC-TACTTCTTTTTTAGC-TACTTCTTTTTTAGC-TACTTCTTTTTTAGC | Design primers |
| 1583688 | GTATTTCTTAAT-ATATTTCTTAAT-ATATTTCTTAAT-ATATTTCTTAAT-ATATTTCTTAAT | Design primers |
| 1633995 | TATCTTATAG-AATCTTATAG-AATCTTATAG | Design primers |
| 1637071 | ATAAAAC-AAGAAAC-AAGAAAC-AAGAAAC-AAGAAAC-AAGAAAC-AAGAAAC-AAGAAAC-AAGAAAC | Design primers |
| 1640899 | GCATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG-AGATTAGATTAG | Design primers |
| 1668221 | TAGATTTATAGTCTT-AAGATTTATAGTCTT-AAGATTTATAGTCTT-AAGATTTATAGTCTT-AAGATTTATAGTCTT-AAGATTTATAGTCTT | Design primers |
| 1823852 | CATCGCCCC-CATCGCCCC-CATCGCCCC | Design primers |
| 1835455 | TAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT-AAGAGATAT | Design primers |
| 1866185 | TTTTTAAGTTCT-GTTTTAAGTTCT-GTTTTAAGTTCT | Design primers |
| 1912809 | TTATTTAG-ATATTTAG-ATATTTAG-ATATTTAG-ATATTTAG-ATATTTAG | Design primers |
| 1947416 | CAGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA-GCGATTA | Design primers |
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