Microsatellites /Tandem Repeats database

Genome: Escherichia coli UM146

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
584656CCTGCG-CCTGCG-CCTGCG-CCTGCGDesign primers
640767TCAGGGAAT-TCAGGGAAT-TCAGGGAATDesign primers
1042696GTTAAGA-CTCAAGA-CTCAAGA-CTCAAGA-CTCAAGA-CTCAAGA-CTCAAGA-CTCAAGA-CTCAAGADesign primers
1042765GTTAAGA-CTCAAGA-CTCAAGA-CTCAAGA-CTCAAGA-CTCAAGA-CTCAAGA-CTCAAGA-CTCAAGADesign primers
1476936GGTATCTG-TGTATCTG-TGTATCTG-TGTATCTG-TGTATCTG-TGTATCTGDesign primers
1984918GGTGGTGAGTCTGGCGGTGGTGAGTCCGGCGGTGGTGAGTCCGGCDesign primers
1984975GGTGGTGGTGAGTCCGGTGGTGGTGAGTCTGGCGGTGGTGAGTCCDesign primers
2596066AATATGAACA-GATATGAACA-GATATGAACADesign primers
3422041TGGCAAAGAGTTAATAAATGGCGAAGAGTTAATAAATGGCGAAGAGTTAATAAADesign primers
3989975CGGTGC-AGGTGC-AGGTGC-AGGTGC-AGGTGC-AGGTGCDesign primers
4556483TGTTCTGCGG-GGTTCTGCGG-GGTTCTGCGG-GGTTCTGCGGDesign primers
4606239GATACCGGG-GATACCGGG-GATACCGGG-GATACCGGGDesign primers

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