Microsatellites /Tandem Repeats database

Genome: Propionibacterium acnes 6609

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
110860GGCGGCGATGGTGGCGATGGCGGCCATDesign primers
144337GGGCTGGGGCTTGGCCTGGCGCTGDesign primers
600994CCCGC-CCCGC-CCCAC-CCCTC-CCCGGDesign primers
605838TCGTGGTTTTGTGGTTTCGGGGTTDesign primers
606123TG-TG-TG-TG-CG-TG-TG-TG-GG-TG-GG-TGDesign primers
907941CCGTCG-CCGTCG-TCGCCG-TCGTCG-CCGDesign primers
1611798CGACCACGGCCACCACCACGTCCADesign primers
1718868CGGCGCGACGTGGCGCGACGTGGCGDesign primers
1732045TGGGAAGCGATGGGCAGCGATGGGTCGCGADesign primers
1868923CCCGGCCCCAACCCCGAC-GCCGACACCAACCCCGAC-GCCGACACCAACCCCGAC-GCCGACACCAACCCCGAC-GCCGACACCAACCCCGAC-GCCGACACCAACCCCGACDesign primers
1902243CGGCGTTGCGTCCTGGACGCACATT-AAGTTCTGCGTCCTGGACGCACATT-AAGTTCTGCGTCCTGGACGCACATT-AAGTTCTGCGTCCTGGACGCACATTDesign primers
2038365GTCGGAGTCGGCGTGGGAGTAGGAGTCGGCGTCGGCDesign primers
2303297CCGACTCCTACTCCGACTCCCACTCCTACTDesign primers
2303328CAACACCAAAACCAACCCCAACTCCAACACCAAAACCAACCCCAACACDesign primers
2333737AATACCGCGGGTAATAATGGCGGCACCGAGGGTAATAATGGCGGCACCGAGGGTAATAATGGCDesign primers
2393944CCTACG-CCGACA-CCGACA-CCGGCT-CCGACA-CCGACA-CCGGCT-CCGACA-CCGACADesign primers
2394016CCGACACCGACACCGGCTCCGACACCGACACCAACGDesign primers
2533317GCAAACCATGGCAAAACATCGCAATCCTTGDesign primers

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