Microsatellites /Tandem Repeats database

Genome: Neisseria meningitidis G2136

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
214013GCCAATCC-GCCAATCC-GCCAATCCDesign primers
283075GCCAAAGCT-GCCAAAGCT-GCCAAAGCTDesign primers
283103CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTGDesign primers
372964GGAATACCCGAATCGTCAGGAATACCTGAATCGTCAGGAATACCTGAATCGTCADesign primers
426249TTTGTTTTGCTGGTGCTGCCGCCT-GTTGTTTTGCTGGTGCTGCCGCCT-GTTGTTTTGCTGGTGCTGCCGTCTDesign primers
564427TCGTGGTCATGA-TCGTGGTCATGA-TCGTGGTCGTGADesign primers
604900ATAAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAACDesign primers
723852GGCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTTDesign primers
910669GGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAGDesign primers
979842TGTCATTGGTGTTTTCATTGGTGTTTTCATTGGTGTDesign primers
1053364GGGCTGTAGAGA-TGGCTGTAGAGA-TGGCTGTAGAGADesign primers
1053401GGGCTGTAGAGA-TGGCTGTAGAGA-TGGCTGTAGAGADesign primers
1053450TGGCTGTAGAGAC-GGGCTGTAGAGAC-GGGCTGTAGAGACDesign primers
1053502GGCTGTAGAGACG-GGCTGTAGAGATG-GGCTGTAGAGATG-GGCTGTAGAGATGDesign primers
1184186GGGCT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGT-TGGGTDesign primers
1307804ATAG-CCAG-CCAG-CCAG-CCAG-CCAG-CCAG-CCAG-CCAG-CCAG-CCAG-CCAG-CCAG-CCAG-CCAGDesign primers
1345064ATAACAAA-ATAACAAA-ATAACAAADesign primers
1420055GGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAGDesign primers
1423771GCTTCAGTTACAGCTTCTTTG-GCTTCAGTTACAGCTTCTTTG-GCTTCAGTTACAGCTTCCTCGDesign primers
1459604CCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAADesign primers
1500327TCAGCTTCAACTTCAACTTCAACTTCAGCTTCAACTDesign primers
1503324CCCACGAACCTGCATCCCGTCATTCCCACGCACCTGCATCCCGTCATTCCCACGAACCTACATTCCGTCATTDesign primers
1503581AACCTGCACCACGTCATTCCCACG-AACCTGCACCACGTCATTCCCACG-AACCTGCATCCCGTCATTCCCACG-AACCTGCATCCCGTCATTCCCACG-AACCTGCATCCCGTCATTCCCACG-AACCTGCATCCCGTCATTCCCACGDesign primers
1593899CCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTCDesign primers
1747416GAAACCTGCACCACGTCATTCCCA-CGAACCTGCACCACGTCATTCCCA-CGAACCTGCACCACGTCATTCCCADesign primers
1767964CCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTCDesign primers
1834416GGGTAGCGG-GGGTAGCGG-GGGTAGCGG-GGGTAGCGGDesign primers
1856961ACCGTATTTTCCC-ATCGTATTTTCCC-ATCGTATTTTCCC-ATCGTATTTTCCC-ATCGTATTTTCCCDesign primers
1904973CCGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGCDesign primers
2006985TTCGTCATTCCCGCGCAGGCCTCGTCATTCCCGCACAGGCTTCGTCATTCCCGCGCAGGCDesign primers
2015063AATT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAATDesign primers
2104527AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AADesign primers

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