This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 214013 | GCCAATCC-GCCAATCC-GCCAATCC | Design primers |
| 283075 | GCCAAAGCT-GCCAAAGCT-GCCAAAGCT | Design primers |
| 283103 | CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG | Design primers |
| 604903 | AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC | Design primers |
| 723854 | CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT | Design primers |
| 910670 | GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA | Design primers |
| 979844 | TCATTGGTGTTT-TCATTGGTGTTT-TCATTGGTGTTT | Design primers |
| 1053451 | GGCTGTAGAGACG-GGCTGTAGAGACG-GGCTGTAGAGACG | Design primers |
| 1053514 | GGGCTGTAGAGAT-GGGCTGTAGAGAT-GGGCTGTAGAGAT | Design primers |
| 1184190 | TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG | Design primers |
| 1307806 | AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC-AGCC | Design primers |
| 1345064 | ATAACAAA-ATAACAAA-ATAACAAA | Design primers |
| 1420056 | GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA | Design primers |
| 1459605 | CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG-CAAG | Design primers |
| 1503616 | CGTCATTCCCACGAACCTGCATCC-CGTCATTCCCACGAACCTGCATCC-CGTCATTCCCACGAACCTGCATCC-CGTCATTCCCACGAACCTGCATCC | Design primers |
| 1593900 | CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT | Design primers |
| 1747418 | AACCTGCACCACGTCATTCCCACG-AACCTGCACCACGTCATTCCCACG-AACCTGCACCACGTCATTCCCACG | Design primers |
| 1767965 | CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT | Design primers |
| 1834416 | GGGTAGCGG-GGGTAGCGG-GGGTAGCGG-GGGTAGCGG | Design primers |
| 1856963 | CGTATTTTCCCAT-CGTATTTTCCCAT-CGTATTTTCCCAT-CGTATTTTCCCAT | Design primers |
| 1904975 | GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT | Design primers |
| 2015066 | TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA | Design primers |
| 2104527 | AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA | Design primers |
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