This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 131940 | AAACAGGAAAAAGCC-AAACAGAAAAAAGCC-AAACAGAAAAAAGCC-AAACAGAAAAAAGCC-AAACAGAAAAAAGCC | Design primers |
| 132026 | AGCGAAACAGAAAAA-AGCCAAACAGAAAAA-AGCCAAACAGAAAAA-AGCCAAACAGAAAAA-AGCCAAACAGAAAAA | Design primers |
| 136410 | TTCGTGGGAATGACGGAATGTAGGTTCGTAGGAATGACGGAATGTAGGTTCGTAGGAATGACGGGATGTAGG | Design primers |
| 187809 | AATT-TATT-TATT-TATT-TATT-TATT-TATT-TATT-TATT-TATT-TATT-TATT | Design primers |
| 196208 | CCGCCTGCGCGGGAATGACGAGGCCTGCGCGGGAATGACGAAGCCTGCGCGGGAATGACG | Design primers |
| 220648 | CGTGGGAATGACGGAGAGTCGCGGGAATGACGGAGAGTCGCGGGAATGACGGAGAGT | Design primers |
| 220706 | GCGGGAATGACGGAGAGTT-GCGGGAATGACGGAGAGTT-GCGGGAATGACGGAGAGTT | Design primers |
| 348752 | GGAATACCCGAATCGTCAGGAATACCTGAATCGTCAGGAATACCTGAATCGTCAGGAATACCCGAACCGTCA | Design primers |
| 403427 | TTTGTTTTGCTGGTGCCGCCGCCTGTTGTTTTGCTGGTGCTGCCGCCTGTTGTTTTGCTGATGCCGCCGCCT | Design primers |
| 586058 | ATAAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC-AACAAAC | Design primers |
| 651348 | GGGAATGACGAAAAGTGGCGGGAATGACGAAAAGTAGCGGGAATGACGAAAAGTGGT | Design primers |
| 691602 | GGCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT-CTCATTT | Design primers |
| 1009811 | GGGTTGTAGAGA-TGGCTGTAGAGA-TGGCTGTAGAGA-TGGCTGTAGAGA-TGGCTGTAGAGA-TGGCTGTAGAGA-TGGCTGTAGAGA-TGGCTGTAGAGA | Design primers |
| 1009908 | AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT-AGCTGTAGAGAT | Design primers |
| 1010065 | GGTTGTAGAGATGGGTTGTAGAGACGAGTTGTAGAGATG | Design primers |
| 1139435 | GGCTT-GGGTT-GGGTT-GGGTT-GGGTT-GGGTT-GGGTT-GGGTT-GGGTT-GGGTT | Design primers |
| 1295632 | AGGCGTGCGGACGTATTCTGC-CTGCGTGCGGACGTATTCTGC-CTGCGTGCGGACGTATTCTGC | Design primers |
| 1298474 | GTTTTCAGCT-GTTTTCAGCT-GTTTTCGGCT | Design primers |
| 1376711 | GGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG | Design primers |
| 1511137 | CCCACCAACT-CCCACCAACT-CCCACCATCT | Design primers |
| 1581410 | CCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC | Design primers |
| 1750398 | ACCTT-CTCTT-CTCTT-CTCTT-CTCTT-CTCTT-CTCTT-CTCTT-CTCTT-CTCTT-CTCTT-CTCTT | Design primers |
| 1931028 | CGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT | Design primers |
| 1966021 | CGGCAACTT-TGGCAACTT-TGGCAACTT-TGGCAACTT-TGGCAACTT-TGGCAACTT | Design primers |
| 1966081 | CTTTGGCAG-CTTTGGCAG-CTTTGGCAG-CTTTGGCAG | Design primers |
| 2036379 | CCCACCAAT-CACACCAAT-CACACCAAT-CACACCAAT-CACACCAAT-CACACCAAT | Design primers |
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